Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AF127577.6-201ENST00000623352 2191 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 RPS20P25-201ENST00000412447 352 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 RPL30P3-201ENST00000424262 333 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 MUPP-201ENST00000438111 566 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.33□□□□□ -2.04
FREM3P0C091 GSTA11P-201ENST00000452866 669 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 AP002884.2-201ENST00000471647 395 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 AC092451.1-201ENST00000480211 153 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 AC005912.1-201ENST00000495392 255 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 CKS1BP7-201ENST00000522230 235 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.33□□□□□ -2.04
FREM3P0C091 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.33□□□□□ -2.04
FREM3P0C091 TPMTP1-201ENST00000592307 737 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.33□□□□□ -2.04
FREM3P0C091 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.33□□□□□ -2.04
FREM3P0C091 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
FREM3P0C091 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.33□□□□□ -2.04
FREM3P0C091 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
FREM3P0C091 AC005183.1-201ENST00000603687 1979 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.32□□□□□ -2.04
FREM3P0C091 RSL24D1P4-201ENST00000400938 484 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 SNORD88.1-201ENST00000408684 91 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 TOMM20P4-201ENST00000427861 435 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AC005189.1-201ENST00000431286 310 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 RN7SL636P-201ENST00000497504 294 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.32□□□□□ -2.04
FREM3P0C091 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.32□□□□□ -2.04
FREM3P0C091 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.32□□□□□ -2.04
FREM3P0C091 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.32□□□□□ -2.04
FREM3P0C091 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 AC006270.2-201ENST00000578523 652 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.32□□□□□ -2.04
FREM3P0C091 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 AC105429.2-201ENST00000610567 517 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.32□□□□□ -2.04
FREM3P0C091 AL049780.3-201ENST00000624612 1583 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.32□□□□□ -2.04
FREM3P0C091 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
FREM3P0C091 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
FREM3P0C091 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 AC003685.2-201ENST00000422795 395 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 ARF4P2-201ENST00000430209 526 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AL121890.1-201ENST00000435457 205 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 RPL32P28-201ENST00000443577 397 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 AC008571.1-201ENST00000467232 300 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.32□□□□□ -2.04
FREM3P0C091 HMGB1P41-201ENST00000520234 440 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
FREM3P0C091 AL133271.1-201ENST00000538229 291 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.32□□□□□ -2.04
FREM3P0C091 RPL12P50-201ENST00000603116 116 ntBASIC2.32□□□□□ -2.04
FREM3P0C091 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.32□□□□□ -2.04
FREM3P0C091 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 AC096656.1-201ENST00000623826 1364 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 MAPK10-362ENST00000641864 4484 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 AC097714.1-201ENST00000511272 1647 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
FREM3P0C091 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.31□□□□□ -2.04
FREM3P0C091 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 EIF5P1-201ENST00000400019 1231 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC007563.3-201ENST00000433233 371 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.31□□□□□ -2.04
FREM3P0C091 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 NPM1P13-201ENST00000452663 865 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 RPL37P6-202ENST00000464216 403 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC126182.1-201ENST00000478134 357 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AP001960.1-201ENST00000506494 658 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC010265.1-201ENST00000513509 211 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.31□□□□□ -2.04
FREM3P0C091 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.31□□□□□ -2.04
FREM3P0C091 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.31□□□□□ -2.04
FREM3P0C091 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.31□□□□□ -2.04
FREM3P0C091 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.31□□□□□ -2.04
FREM3P0C091 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC104984.5-201ENST00000586878 94 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC121761.2-201ENST00000617300 689 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 AC015726.3-201ENST00000624501 418 ntBASIC2.31□□□□□ -2.04
FREM3P0C091 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
FREM3P0C091 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FREM3P0C091 CUL1P1-201ENST00000509510 2425 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms