Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.39□□□□□ -1.71
TOP3BO95985 ZNF519P2-201ENST00000557032 169 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.39□□□□□ -1.71
TOP3BO95985 AC124068.1-201ENST00000563131 678 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 AC018552.3-201ENST00000567416 561 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.39□□□□□ -1.71
TOP3BO95985 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.39□□□□□ -1.71
TOP3BO95985 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.39□□□□□ -1.71
TOP3BO95985 AC004067.1-201ENST00000608733 700 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 AL031666.3-201ENST00000609320 1006 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.39□□□□□ -1.71
TOP3BO95985 AC090517.2-201ENST00000614966 680 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 AL158196.1-201ENST00000616786 434 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 AL356321.1-201ENST00000621360 228 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TOP3BO95985 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.39□□□□□ -1.71
TOP3BO95985 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP3BO95985 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP3BO95985 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP3BO95985 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
TOP3BO95985 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP3BO95985 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 AL079343.1-201ENST00000572358 1771 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TOP3BO95985 RNU1-15P-201ENST00000353977 144 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TOP3BO95985 RNU6-374P-201ENST00000364146 108 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 MIR513A2-201ENST00000385249 127 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.38□□□□□ -1.71
TOP3BO95985 CCDC58P2-201ENST00000417131 366 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 BOLA3P4-201ENST00000418151 400 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.38□□□□□ -1.71
TOP3BO95985 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TOP3BO95985 AC073335.1-201ENST00000427776 363 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 AL445584.1-201ENST00000431451 330 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.38□□□□□ -1.71
TOP3BO95985 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.38□□□□□ -1.71
TOP3BO95985 NANOGNBP1-201ENST00000448444 480 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 OR9M1P-201ENST00000459641 921 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 RPL31P58-201ENST00000469001 379 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 TMED11P-201ENST00000479478 690 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.38□□□□□ -1.71
TOP3BO95985 OR4G11P-201ENST00000492842 939 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.38□□□□□ -1.71
TOP3BO95985 KRT19P6-201ENST00000510983 209 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 NPM1P41-201ENST00000512920 831 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 RNU6-506P-201ENST00000516553 94 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 MYL12AP1-201ENST00000518490 515 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TOP3BO95985 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TOP3BO95985 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.38□□□□□ -1.71
TOP3BO95985 PDCD5P1-201ENST00000543528 309 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.38□□□□□ -1.71
TOP3BO95985 ADI1P3-201ENST00000549509 470 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC093519.1-201ENST00000566109 298 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 SNORA59B-202ENST00000578183 701 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 RN7SL703P-201ENST00000578485 302 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC090312.1-201ENST00000580637 348 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC090970.3-201ENST00000612566 866 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 CR392039.5-201ENST00000623201 510 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP3BO95985 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TOP3BO95985 PABPC1P9-201ENST00000426076 1612 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 ASNSP1-201ENST00000518311 1939 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TOP3BO95985 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
TOP3BO95985 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.38□□□□□ -1.71
TOP3BO95985 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TOP3BO95985 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TOP3BO95985 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP3BO95985 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP3BO95985 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TOP3BO95985 TEX21P-201ENST00000447107 1476 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TOP3BO95985 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TOP3BO95985 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP3BO95985 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.37□□□□□ -1.71
TOP3BO95985 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.37□□□□□ -1.71
TOP3BO95985 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TOP3BO95985 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.37□□□□□ -1.71
TOP3BO95985 RNU6-797P-201ENST00000363101 109 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.37□□□□□ -1.71
TOP3BO95985 SUGT1P1-201ENST00000379514 476 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 SNORA9-201ENST00000384215 133 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 MIR200C-201ENST00000384980 68 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 AC016831.2-201ENST00000417179 352 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 AL356095.1-201ENST00000417217 199 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 AL139095.3-201ENST00000419672 1203 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 RPL31P54-201ENST00000429803 370 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 AL513175.1-201ENST00000431492 780 ntBASIC4.37□□□□□ -1.71
TOP3BO95985 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms