Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CENPUP2-201ENST00000555897 1186 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC006130.2-201ENST00000586202 326 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC008687.2-201ENST00000597865 520 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC244505.7-201ENST00000599675 272 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC018714.1-201ENST00000605028 208 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC105129.3-201ENST00000605455 485 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 OR2AS2P-201ENST00000606902 342 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC004223.4-201ENST00000612426 332 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 OR4A15-201ENST00000314706 1035 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 MIR199A2-201ENST00000385289 110 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 RPL23AP47-201ENST00000408017 460 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 RN7SKP156-201ENST00000410308 342 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 PIGPP2-201ENST00000411569 458 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC011742.1-201ENST00000431448 434 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 USP9YP7-201ENST00000436723 430 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 USP9YP32-201ENST00000452432 430 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 SYPL1P1-201ENST00000473622 768 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 RAP1BP2-201ENST00000478270 544 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 SCARNA14-201ENST00000516903 136 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 RNU1-45P-201ENST00000517191 141 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC023632.4-201ENST00000517783 191 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AP001207.1-201ENST00000524051 481 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC034105.4-201ENST00000568304 277 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 MTCYBP33-201ENST00000575007 1130 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC087499.8-201ENST00000578406 226 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC011260.1-201ENST00000578420 472 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 MIR3915-201ENST00000578518 97 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC113194.1-201ENST00000606037 500 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC005332.6-201ENST00000613178 446 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC005344.1-201ENST00000613391 459 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC069209.1-201ENST00000619282 651 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AL713922.2-201ENST00000619384 716 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AL607023.1-201ENST00000620045 248 ntBASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX9Q9Y5X1 AP004289.2-201ENST00000444413 1457 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 ELL2P3-201ENST00000457883 1602 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC016716.1-201ENST00000265882 708 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC007685.1-201ENST00000329806 452 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 MIR423-201ENST00000362201 94 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 RNU6-492P-201ENST00000363035 104 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 RNU6-356P-201ENST00000384140 107 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 MIR554-201ENST00000384874 96 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL590704.1-201ENST00000402856 794 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL021407.1-201ENST00000404531 386 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL136133.1-201ENST00000413694 376 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL445584.1-201ENST00000431451 330 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL591503.2-201ENST00000442314 1005 ntBASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX9Q9Y5X1 MTND1P29-201ENST00000448112 647 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms