Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 BX323014.1-201ENST00000412876 237 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC108734.1-201ENST00000439549 399 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RPS11P7-201ENST00000442125 465 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AL731563.1-201ENST00000442202 214 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RPS29P15-201ENST00000458329 171 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AL133445.1-201ENST00000467051 452 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 SIAH1P1-201ENST00000479411 923 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC092436.1-201ENST00000506450 503 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 MTCO2P24-201ENST00000515611 426 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RNU6-941P-201ENST00000516346 108 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RNU6-1088P-201ENST00000516850 104 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RNU6-988P-201ENST00000519081 107 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AP003122.3-201ENST00000526316 255 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC053481.3-201ENST00000577881 843 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 BNIP3P25-201ENST00000596023 559 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC011445.2-201ENST00000599274 173 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC099494.2-201ENST00000623371 978 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AL159972.1-201ENST00000625150 448 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC074101.1-201ENST00000637861 241 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AC119674.1-207ENST00000641355 633 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 MAPK10-338ENST00000641647 3362 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 HSPA8P14-201ENST00000552265 1805 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 Y_RNA.167-201ENST00000363735 109 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 RNU1-146P-201ENST00000364015 165 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 RNA5SP435-201ENST00000364044 108 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 RNU6-1013P-201ENST00000384180 107 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 RNU6-784P-201ENST00000384330 106 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AL606923.1-201ENST00000406616 190 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC009302.1-201ENST00000417147 390 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 NOP56P2-201ENST00000447491 769 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC107399.1-201ENST00000451226 265 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 HMGB1P15-201ENST00000453854 435 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 RN7SL814P-201ENST00000487715 300 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC024558.1-201ENST00000505008 528 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 MTND4LP22-201ENST00000508209 276 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 RNA5SP373-201ENST00000517271 95 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 OR5D15P-201ENST00000531671 942 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC060771.1-201ENST00000582031 164 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 MIR6839-201ENST00000620425 113 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 AC000123.2-201ENST00000623124 461 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 CYP3A51P-201ENST00000633513 256 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 OR55B1P-203ENST00000641518 2602 ntBASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
AP4E1Q9UPM8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC005005.4-201ENST00000623789 16698 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC097461.1-201ENST00000568928 2821 ntBASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
AP4E1Q9UPM8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms