Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RNA5SP307-201ENST00000362863 116 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RNU6-777P-201ENST00000364265 104 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RNA5SP372-201ENST00000390836 115 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AF274854.1-201ENST00000413236 615 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 NPM1P34-201ENST00000428821 893 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 HSPE1P28-201ENST00000443139 211 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RPL21P89-201ENST00000444021 467 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 Z95327.1-201ENST00000446082 482 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AL162151.2-201ENST00000448875 158 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RPL7P31-201ENST00000450192 724 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 OR6K1P-201ENST00000456766 971 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 PLGLA-201ENST00000465668 449 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RPL31P50-201ENST00000471002 296 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AF131216.2-201ENST00000512316 564 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RNA5SP73-201ENST00000516744 108 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 COX6CP8-201ENST00000522620 226 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 MTND4LP18-201ENST00000526864 291 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 OR5AP1P-201ENST00000529730 940 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC107918.3-201ENST00000533272 382 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC092470.1-201ENST00000546187 132 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 ZNF519P3-201ENST00000557158 1032 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 RPL23AP97-201ENST00000568955 471 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AP001094.1-201ENST00000579805 193 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AP001180.3-201ENST00000582221 145 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AL160290.3-201ENST00000604869 165 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 NDUFA8P1-201ENST00000605525 367 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC087241.4-201ENST00000612441 480 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 Z99129.1-201ENST00000612510 255 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC018755.4-201ENST00000619715 454 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC140113.4-201ENST00000622087 222 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 AC006378.2-201ENST00000623178 2476 ntBASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
DNMT3BQ9UBC3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 RNU1-20P-201ENST00000363314 162 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 SNORA68.2-201ENST00000391263 128 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 VDAC1P9-201ENST00000412766 841 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 MTCO2P5-201ENST00000422621 426 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 OR5BE1P-201ENST00000425977 939 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 OR4F13P-201ENST00000428478 931 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 RPL23AP25-201ENST00000430973 463 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 SKP1P1-201ENST00000438081 489 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 BX322784.1-201ENST00000455793 1077 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC087312.1-201ENST00000471411 480 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL136126.1-201ENST00000473603 402 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC104563.1-201ENST00000476147 376 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 HMGB1P21-201ENST00000502313 581 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL592156.1-201ENST00000508758 304 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC109464.2-201ENST00000510242 943 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AP003392.2-201ENST00000527269 208 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL139174.1-201ENST00000531489 886 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC245505.1-201ENST00000556398 224 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC084757.1-201ENST00000559987 490 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 MTND1P15-201ENST00000579262 949 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC090312.1-201ENST00000580637 348 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC007566.2-201ENST00000603642 413 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC091805.2-201ENST00000603848 235 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 SEPT7P9-203ENST00000604116 343 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AC245389.1-201ENST00000605141 529 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 MIR92B-201ENST00000607575 96 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 AL513477.2-201ENST00000607858 568 ntBASIC4.49□□□□□ -1.69
DNMT3BQ9UBC3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms