Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 RPS6P14-201ENST00000425165 719 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 CDC42P1-201ENST00000456658 548 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 RN7SL385P-201ENST00000468873 276 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC091959.2-201ENST00000477363 321 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC104619.4-201ENST00000510773 249 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 GTF2IP22-201ENST00000554443 182 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC018755.4-201ENST00000619715 454 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AC092650.2-201ENST00000619984 902 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AL079305.1-201ENST00000623159 3008 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 AL645568.2-201ENST00000432815 1337 ntBASIC2.9□□□□□ -1.95
CLN6Q9NWW5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.95
CLN6Q9NWW5 MAPK10-362ENST00000641864 4484 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC111188.2-201ENST00000529697 1387 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC130650.2-201ENST00000618736 2403 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AL354719.1-201ENST00000406535 843 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AL023807.1-201ENST00000407932 359 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC073063.1-201ENST00000434352 607 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC092641.1-201ENST00000440229 772 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 RPL17P49-201ENST00000443728 411 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 HMGN2P13-201ENST00000476476 274 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC118282.1-201ENST00000506408 765 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 RNU1-95P-201ENST00000516357 160 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 RNU1-128P-201ENST00000516704 160 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 MTCO1P49-201ENST00000523429 802 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC087481.2-201ENST00000565492 330 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC006116.7-201ENST00000590141 756 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC133794.1-201ENST00000602731 914 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AL162713.1-201ENST00000604480 262 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC006329.2-201ENST00000611491 394 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 AC009093.8-201ENST00000641769 292 ntBASIC2.89□□□□□ -1.95
CLN6Q9NWW5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.89□□□□□ -1.95
CLN6Q9NWW5 ZNF849P-201ENST00000594711 1566 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 ZNF285B-201ENST00000561698 1767 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 RPL23AP57-201ENST00000332361 466 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 RNU6-730P-201ENST00000383954 104 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 TMSB4XP8-201ENST00000402089 135 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 RN7SKP263-201ENST00000411194 309 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 TMSB4XP6-201ENST00000415187 135 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 MRPL50P2-201ENST00000416821 482 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 TMSB4XP1-201ENST00000424567 135 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 RPL7P46-201ENST00000425129 740 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC234064.1-201ENST00000436312 247 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 RPS12P18-201ENST00000442381 270 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 H2AFZP6-201ENST00000444403 394 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 GXYLT1P1-201ENST00000446657 490 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 NDUFA5P7-201ENST00000452914 242 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 TRBV26-201ENST00000456572 344 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 ACTR3P3-201ENST00000480448 893 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC106707.2-201ENST00000484182 374 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC093663.1-201ENST00000497190 394 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AC109471.1-201ENST00000511631 612 ntBASIC2.88□□□□□ -1.95
CLN6Q9NWW5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms