Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL356266.1-201ENST00000623311 483 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC084035.1-201ENST00000634543 607 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC092104.1-201ENST00000497346 1441 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 MTCO1P23-201ENST00000415223 1526 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC097504.1-201ENST00000515103 2415 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RNU6-660P-201ENST00000364566 109 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 OR5H15-201ENST00000383696 930 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RNU6-837P-201ENST00000391056 108 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RNA5SP44-201ENST00000410446 133 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RNA5SP104-201ENST00000410989 118 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 MTCO2P34-201ENST00000421994 607 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AL953862.1-201ENST00000423016 168 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RPL23AP38-201ENST00000423801 469 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC006548.1-201ENST00000427470 102 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 ELOCP30-201ENST00000447108 299 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 TRGVB-201ENST00000453257 471 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 USP9YP34-201ENST00000453983 808 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 ARPC3P2-201ENST00000457786 533 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RPS15AP17-201ENST00000470598 390 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 MTCYBP17-201ENST00000503579 789 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC108145.1-201ENST00000503770 153 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC093767.1-201ENST00000504523 156 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RNA5SP216-201ENST00000516111 123 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC060788.1-201ENST00000521318 469 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 DEFB131D-201ENST00000526803 184 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RPL23AP97-201ENST00000568955 471 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC112230.1-201ENST00000604342 547 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AL139286.2-201ENST00000606838 396 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC073968.1-201ENST00000618594 637 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC007546.2-201ENST00000623996 360 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC067931.1-201ENST00000624190 671 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC231657.1-201ENST00000624313 397 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 CR381572.1-201ENST00000625098 102 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 NUP58P1-201ENST00000502546 1738 ntBASIC4.52□□□□□ -1.69
VPS45Q9NRW7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS45Q9NRW7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MIR383-201ENST00000362257 73 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RNU4-75P-201ENST00000364621 146 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MIR93-201ENST00000385024 80 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MT-TC-201ENST00000387405 66 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RNU6-192P-201ENST00000391253 100 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RPL17P50-201ENST00000396131 546 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 MTND4LP20-201ENST00000402379 270 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RNU6-648P-201ENST00000410190 107 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 PGBD4P8-201ENST00000412993 562 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC114495.1-201ENST00000441274 436 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 TRIM60P18-201ENST00000441518 828 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS45Q9NRW7 AC053481.1-201ENST00000467217 306 ntBASIC4.51□□□□□ -1.69
VPS45Q9NRW7 RN7SL132P-201ENST00000478131 296 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms