Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Y_RNA.672-201ENST00000516289 104 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-714P-201ENST00000516963 103 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-201P-201ENST00000517100 61 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 IGLV3-26-201ENST00000520756 302 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AP001893.2-201ENST00000526949 202 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 FAM92A1P1-201ENST00000528023 890 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AP003181.2-201ENST00000528941 181 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RN7SL802P-201ENST00000577858 299 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RPL7P50-201ENST00000600588 727 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL390208.1-201ENST00000605885 644 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AP001521.2-201ENST00000608772 546 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL590282.1-201ENST00000610379 1136 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC087385.3-201ENST00000620477 187 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC004009.2-201ENST00000623016 728 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 CR381572.2-201ENST00000624852 397 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 ELL2P4-201ENST00000446870 1376 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 OR51H2P-202ENST00000641424 3046 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL592148.3-201ENST00000608771 2646 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 SCN1A-220ENST00000641603 12506 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-28P-201ENST00000362378 107 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RNU1-108P-201ENST00000362556 161 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RNU2-21P-201ENST00000410368 188 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RNU4-55P-201ENST00000410731 137 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 MTATP6P27-201ENST00000416987 621 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC069157.1-201ENST00000421749 137 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RPS26P47-201ENST00000427219 348 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RPS4XP4-201ENST00000443195 763 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC112653.1-201ENST00000443851 386 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC019235.1-201ENST00000503847 207 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 GAPDHP56-201ENST00000506031 988 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC093824.1-201ENST00000508796 343 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 OR5AQ1P-201ENST00000527596 927 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC100770.1-201ENST00000532310 322 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC018552.3-201ENST00000567416 561 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC034268.2-201ENST00000571784 482 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AL353997.4-201ENST00000586196 166 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC006504.3-201ENST00000586818 523 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC022726.1-201ENST00000587475 207 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC245014.2-201ENST00000603689 287 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC020910.3-201ENST00000603701 874 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC011468.4-201ENST00000603942 409 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AL139286.1-201ENST00000604465 483 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC246785.4-201ENST00000605374 287 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC104458.1-201ENST00000608243 463 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 MLECP1-201ENST00000615893 709 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC002553.4-201ENST00000616896 331 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 AC099654.14-201ENST00000638599 341 ntBASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AMBRA1Q9C0C7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC097714.1-201ENST00000511272 1647 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms