Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 RPL26P29-201ENST00000415623 438 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AL391219.1-201ENST00000422570 483 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AL645608.4-201ENST00000423619 154 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 HSPE1P28-201ENST00000443139 211 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 MTND6P13-201ENST00000443510 523 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC112498.1-201ENST00000444401 332 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC099563.1-201ENST00000456086 418 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 RPS5P7-201ENST00000456664 608 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC146507.1-201ENST00000468335 354 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC006463.2-201ENST00000473326 348 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC108022.1-201ENST00000493466 478 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC012170.1-201ENST00000495139 359 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC112204.1-201ENST00000502591 103 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 MTCO2P4-201ENST00000517968 247 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 RPL21P5-201ENST00000554662 472 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AP005205.1-201ENST00000563503 508 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC009117.1-201ENST00000563948 554 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC093249.4-201ENST00000564755 259 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC068135.2-201ENST00000569293 1028 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 SNORA59B-202ENST00000578183 701 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 MIR4716-201ENST00000579628 84 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC022726.1-201ENST00000587475 207 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 HMGB2P1-201ENST00000591146 634 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC103792.1-201ENST00000603591 919 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC020910.3-201ENST00000603701 874 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC072046.2-201ENST00000618366 268 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC068880.5-201ENST00000624331 290 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC124864.2-201ENST00000624736 186 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 AL008636.1-201ENST00000625038 1018 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 AC099654.13-201ENST00000639774 207 ntBASIC4.25□□□□□ -1.73
SNX18Q96RF0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX18Q96RF0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SNX18Q96RF0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL122126.1-201ENST00000546905 1318 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX18Q96RF0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 Y_RNA.88-201ENST00000363029 99 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 U3.30-201ENST00000391308 210 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL080315.1-201ENST00000406055 466 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL603766.1-201ENST00000407763 664 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 MTCO1P17-201ENST00000411522 491 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC245052.5-201ENST00000416320 649 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 BX295541.1-201ENST00000417774 250 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC233728.2-201ENST00000425348 757 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL358934.1-201ENST00000432346 324 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 MTND4LP10-201ENST00000435146 291 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 RPS3AP54-201ENST00000435535 734 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 PSPHP1-201ENST00000450062 261 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC005297.2-201ENST00000450430 606 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AURKAPS2-201ENST00000454983 333 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL672167.3-201ENST00000465951 960 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 PABPC1P3-201ENST00000469174 459 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC092989.1-201ENST00000481235 277 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 RNF138P1-201ENST00000502765 546 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC083829.1-201ENST00000503756 657 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC093767.1-201ENST00000504523 156 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC108078.1-201ENST00000508073 725 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC006499.6-201ENST00000511169 607 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.24□□□□□ -1.73
SNX18Q96RF0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX18Q96RF0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms