Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL139099.1-201ENST00000497398 403 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC108941.1-201ENST00000502853 530 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC112198.1-201ENST00000505369 1220 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 RNU6-583P-201ENST00000516012 92 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 MTCO1P47-201ENST00000523889 1271 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AL731566.2-201ENST00000618971 317 ntBASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNE3Q6ZMZ3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 SNORA4.1-201ENST00000364263 144 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 SNORD116-2-201ENST00000384274 95 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 SNORD116-6-201ENST00000384711 96 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC090960.1-201ENST00000421072 306 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC111000.2-201ENST00000507775 550 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC022695.1-201ENST00000522089 237 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC090877.1-201ENST00000561418 344 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AL512347.1-201ENST00000566420 503 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 MIR4504-201ENST00000577413 92 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 MIR3160-1-201ENST00000577972 85 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC022916.3-201ENST00000592961 742 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AL109653.1-201ENST00000603091 248 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC006270.3-201ENST00000605967 1036 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 MIR486-1-201ENST00000612171 68 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC008083.4-201ENST00000615076 444 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AL354798.1-201ENST00000622505 329 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AC026422.1-201ENST00000623961 452 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 MTND5P24-201ENST00000438892 1767 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 DDX43P2-201ENST00000604753 1354 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SYNE3Q6ZMZ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 OR4G11P-202ENST00000642116 1414 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 RNU6-1122P-201ENST00000384449 107 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 RNU1-89P-201ENST00000384592 164 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 HMGB1P17-201ENST00000403495 628 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC073264.1-201ENST00000411508 416 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AF228730.2-201ENST00000438784 848 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 MTND2P22-201ENST00000444325 1033 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC104073.1-201ENST00000451988 151 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC010468.1-201ENST00000461022 817 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 RPL30P6-201ENST00000475925 342 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 BET1P1-201ENST00000482276 359 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC108078.3-201ENST00000502633 489 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 RNF138P1-201ENST00000502765 546 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC004069.2-201ENST00000505438 1114 ntBASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE3Q6ZMZ3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms