Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR6130-201ENST00000619419 109 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC019206.1-201ENST00000621938 425 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AL161637.1-201ENST00000622380 412 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC079597.1-201ENST00000624306 508 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC048347.1-201ENST00000624621 427 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 MARK2P15-201ENST00000432204 2186 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 TAB3P1-202ENST00000452645 1634 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-533P-201ENST00000384144 107 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-297P-201ENST00000384636 107 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AL049693.1-201ENST00000402760 611 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RPL7P25-201ENST00000404151 721 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC078974.1-201ENST00000411597 223 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC004866.2-201ENST00000438285 481 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC092641.1-201ENST00000440229 772 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC104651.2-201ENST00000447549 528 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RPS17P13-201ENST00000448974 407 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AL590365.1-201ENST00000450788 243 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC097484.1-201ENST00000471148 389 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RPL23AP65-201ENST00000475608 468 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RN7SL826P-201ENST00000479724 288 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC022483.1-201ENST00000514020 567 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 MTCO2P32-201ENST00000514865 403 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 RNA5SP392-201ENST00000516905 112 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 MIR4436B2-201ENST00000581415 91 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 MIR4436B1-201ENST00000583272 91 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AL158211.4-201ENST00000606988 584 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 uc_338.32-201ENST00000615087 172 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC092656.1-203ENST00000624134 423 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC068254.2-201ENST00000623938 3577 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 THAP12P4-201ENST00000528321 2266 ntBASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PPP4R4Q6NUP7 AC009902.3-201ENST00000606235 2172 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 SNORA58B-201ENST00000364259 136 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-114P-201ENST00000384704 105 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 SNORD115.1-201ENST00000391109 76 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 DEFB108C-201ENST00000400154 252 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 USP9YP13-201ENST00000417797 480 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 DDX39BP1-205ENST00000422507 192 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 UBE2V1P13-201ENST00000436983 439 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AL772161.1-201ENST00000439130 476 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC007967.1-201ENST00000455422 1159 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 OR9M1P-201ENST00000459641 921 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 RPL9P32-201ENST00000464118 620 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 RN7SL319P-201ENST00000480656 221 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC011005.3-201ENST00000491624 395 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 MTND3P5-201ENST00000512798 333 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC110775.1-201ENST00000513721 462 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 SNORA31.8-201ENST00000516327 108 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 CBX3P5-201ENST00000552017 521 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms