Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR7975-201ENST00000619350 68 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AL121594.5-201ENST00000631724 573 ntBASIC2.26□□□□□ -2.05
HIST1H1AQ02539 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.26□□□□□ -2.05
HIST1H1AQ02539 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AL035425.3-201ENST00000564206 4996 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 MIR670-201ENST00000390142 98 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 RNA5SP38-201ENST00000410750 119 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 RNU2-25P-201ENST00000411041 191 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AL157827.1-201ENST00000447622 132 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC009961.3-201ENST00000449832 765 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC027673.1-201ENST00000456245 405 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC091153.1-201ENST00000466297 402 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC010285.1-201ENST00000470580 392 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 RPS29P2-201ENST00000479278 136 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC108120.2-201ENST00000512973 294 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC025881.1-201ENST00000518851 512 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 OR5G4P-201ENST00000525251 760 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC107016.2-201ENST00000547968 190 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC128657.1-201ENST00000549459 145 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 RPL12P50-201ENST00000603116 116 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 AC016252.1-201ENST00000609721 474 ntBASIC2.25□□□□□ -2.05
HIST1H1AQ02539 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HIST1H1AQ02539 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 NACA3P-201ENST00000359690 648 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AL356057.2-201ENST00000403318 432 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AL158156.1-201ENST00000422509 473 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 RPL6P5-201ENST00000445678 828 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC090525.1-201ENST00000479116 478 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 RN7SL297P-201ENST00000483161 293 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC034105.3-201ENST00000565294 442 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 MIR4446-201ENST00000578505 67 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC009303.3-201ENST00000591103 736 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 MIR7112-201ENST00000616126 65 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC244100.1-202ENST00000621554 382 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC010338.1-201ENST00000621823 717 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 AC010297.1-201ENST00000623948 149 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 FO624990.1-201ENST00000636373 85 ntBASIC2.24□□□□□ -2.05
HIST1H1AQ02539 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.24□□□□□ -2.05
HIST1H1AQ02539 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 MTND4P31-201ENST00000425607 1343 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HIST1H1AQ02539 SNORA38.1-201ENST00000364172 131 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RNA5SP139-201ENST00000364340 117 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RNA5SP267-201ENST00000364893 126 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RNU6-1293P-201ENST00000384077 107 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 ARF4P3-201ENST00000397387 509 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 GSTA8P-201ENST00000404253 637 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RNU6-233P-201ENST00000410845 141 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 RNA5SP120-201ENST00000410900 112 ntBASIC2.23□□□□□ -2.05
HIST1H1AQ02539 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms