Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FCF1P9-201ENST00000412546 282 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AL137014.1-201ENST00000420490 1226 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC099677.1-201ENST00000420575 175 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 RPL7P57-201ENST00000423238 740 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 ISCA1P6-201ENST00000427740 390 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC010655.1-201ENST00000449336 292 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC079168.2-201ENST00000453977 416 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AL591473.1-201ENST00000464297 313 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC093270.2-201ENST00000486157 792 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 RPL7P23-201ENST00000493874 747 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC114967.1-201ENST00000504890 259 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC010460.1-201ENST00000507087 466 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 RN7SKP276-201ENST00000516242 268 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC107934.1-201ENST00000522215 217 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.3□□□□□ -1.72
SUMO3P55854 VN1R79P-201ENST00000593540 513 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 KC877982.1-201ENST00000602313 470 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AL391813.2-201ENST00000609113 322 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 OR6R2P-201ENST00000609216 300 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 AC073534.2-201ENST00000620377 381 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC138649.3-201ENST00000622154 254 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC112204.3-201ENST00000623822 332 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AL159972.1-201ENST00000625150 448 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 AC244258.1-201ENST00000637553 1071 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 MTCO1P9-201ENST00000505577 1534 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC024560.2-201ENST00000507981 1497 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SUMO3P55854 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.29□□□□□ -1.72
SUMO3P55854 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SUMO3P55854 RN7SKP115-201ENST00000363177 317 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 SNORA58B-201ENST00000364259 136 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 RNU1-82P-201ENST00000390851 165 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 RPS3AP36-201ENST00000398190 775 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AL592291.1-201ENST00000403830 352 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 RSU1P3-201ENST00000412878 835 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 UBE2V1P10-201ENST00000414685 269 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 RPS7P15-201ENST00000415804 584 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 CCDC58P2-201ENST00000417131 366 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 OR1AA1P-201ENST00000419597 916 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AC092832.1-201ENST00000422934 400 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 RWDD4P2-201ENST00000426392 563 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 MTND3P21-201ENST00000433774 331 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 MTND1P4-201ENST00000435196 415 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AC005154.2-201ENST00000438110 379 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 TDGF1P1-201ENST00000445734 527 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC083982.1-201ENST00000485679 344 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC018630.1-201ENST00000541376 925 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.29□□□□□ -1.72
SUMO3P55854 AL121603.1-201ENST00000553815 142 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AC006960.3-201ENST00000561845 705 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 MIR4436B2-201ENST00000581415 91 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms