Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC072039.1-201ENST00000477611 581 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC026784.1-201ENST00000507986 352 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC090616.2-202ENST00000584248 222 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC110760.3-201ENST00000598794 467 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC123786.2-201ENST00000603459 275 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC243756.2-201ENST00000618406 463 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AL031667.3-201ENST00000620124 655 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC103858.2-201ENST00000621471 543 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC007494.3-201ENST00000624660 743 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 MTND5P31-201ENST00000419366 1374 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 Y_RNA.408-201ENST00000383987 102 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 CYCSP45-201ENST00000402289 315 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 RN7SKP177-201ENST00000410567 355 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 PTP4A1P5-201ENST00000420305 455 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AL158156.1-201ENST00000422509 473 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 MTND4P20-201ENST00000424125 869 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AL513175.1-201ENST00000431492 780 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 AL606662.1-201ENST00000445763 553 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 ACTG1P13-201ENST00000486987 1043 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AL035404.1-201ENST00000497982 568 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 MTATP6P22-201ENST00000507369 598 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC010587.2-201ENST00000511727 448 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 COX6B1P6-201ENST00000522347 255 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC1P51610 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 MTCYBP33-201ENST00000575007 1130 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 MIR3915-201ENST00000578518 97 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 BNIP3P26-201ENST00000600827 554 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC128687.2-201ENST00000609657 566 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 MIR486-1-201ENST00000612171 68 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC009318.3-201ENST00000616916 503 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC091931.1-201ENST00000623488 728 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC009313.2-201ENST00000417893 1941 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AP000776.1-201ENST00000530032 1663 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC1P51610 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HCFC1P51610 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC1P51610 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
HCFC1P51610 IPO8P1-201ENST00000455509 3109 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC1P51610 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 Y_RNA.25-201ENST00000362528 102 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 RPL23AP47-201ENST00000408017 460 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AL133384.1-201ENST00000412744 351 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AL031736.2-201ENST00000426573 787 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 MTND1P20-201ENST00000430341 950 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 VN1R108P-201ENST00000431580 830 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 ISCA1P2-201ENST00000438679 421 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.23□□□□□ -1.89
HCFC1P51610 MTND1P29-201ENST00000448112 647 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.23□□□□□ -1.89
HCFC1P51610 AL354710.1-201ENST00000453641 246 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 RN7SL271P-201ENST00000487601 295 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 RPS3AP22-201ENST00000488297 769 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC104090.1-201ENST00000506341 1171 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 OR5BM1P-201ENST00000512021 366 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 RN7SKP31-201ENST00000516354 278 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.23□□□□□ -1.89
HCFC1P51610 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.23□□□□□ -1.89
HCFC1P51610 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.23□□□□□ -1.89
HCFC1P51610 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms