Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGA1P17096 AL138785.1-201ENST00000425821 331 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGA1P17096 NEK4P1-201ENST00000433383 879 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 AC098826.1-201ENST00000433943 471 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 UBE2D3P1-201ENST00000436669 444 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HMGA1P17096 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.48□□□□□ -2.01
HMGA1P17096 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.48□□□□□ -2.01
HMGA1P17096 RNU6-964P-201ENST00000516524 69 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGA1P17096 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGA1P17096 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 AC112503.1-201ENST00000608436 391 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 AC009159.1-201ENST00000618386 642 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 C2orf27A-204ENST00000623058 969 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 AC009452.1-201ENST00000640823 606 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.48□□□□□ -2.01
HMGA1P17096 AC005183.1-201ENST00000603687 1979 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 MTND5P6-201ENST00000422338 1798 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 CUL1P1-201ENST00000509510 2425 ntBASIC2.48□□□□□ -2.01
HMGA1P17096 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HMGA1P17096 U8.2-201ENST00000363156 134 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGA1P17096 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.47□□□□□ -2.01
HMGA1P17096 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.47□□□□□ -2.01
HMGA1P17096 AL121890.1-201ENST00000435457 205 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGA1P17096 AL138787.1-202ENST00000437804 898 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 AC034244.2-201ENST00000514668 858 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 HMGB1P41-201ENST00000520234 440 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGA1P17096 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
HMGA1P17096 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.47□□□□□ -2.01
HMGA1P17096 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.47□□□□□ -2.01
HMGA1P17096 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 MTND5P23-201ENST00000430812 1655 ntBASIC2.47□□□□□ -2.01
HMGA1P17096 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HMGA1P17096 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGA1P17096 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HMGA1P17096 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HMGA1P17096 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HMGA1P17096 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HMGA1P17096 RNU6-1320P-201ENST00000390838 107 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 RNU6-1269P-201ENST00000391139 107 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AC007064.1-201ENST00000412238 351 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 NPM1P11-201ENST00000417106 855 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AL356320.1-201ENST00000429616 163 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGA1P17096 MTCYBP31-201ENST00000438855 1122 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGA1P17096 RNU6-599P-201ENST00000459383 107 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 RNU6-1193P-201ENST00000459461 107 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 VN1R17P-201ENST00000472048 1090 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.46□□□□□ -2.02
HMGA1P17096 RPS29P21-201ENST00000496272 170 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AC026412.2-201ENST00000512270 1075 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGA1P17096 ELOCP31-201ENST00000540463 467 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGA1P17096 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGA1P17096 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGA1P17096 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.46□□□□□ -2.02
HMGA1P17096 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.46□□□□□ -2.02
HMGA1P17096 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HMGA1P17096 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.46□□□□□ -2.02
HMGA1P17096 RNU6-368P-201ENST00000620928 107 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 RNU6-538P-201ENST00000622329 107 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.46□□□□□ -2.02
HMGA1P17096 MIR6733-201ENST00000635723 61 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HMGA1P17096 AC092447.7-201ENST00000422212 1621 ntBASIC2.46□□□□□ -2.02
HMGA1P17096 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HMGA1P17096 RNU6-618P-201ENST00000363518 112 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HMGA1P17096 AL590290.1-201ENST00000405336 380 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 BTF3P7-201ENST00000407097 488 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 RN7SKP192-201ENST00000411291 327 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AL135786.1-201ENST00000415892 214 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AL139415.2-201ENST00000431968 163 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HMGA1P17096 AC018634.1-201ENST00000437554 401 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 FAM103A2P-201ENST00000444122 354 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AL513124.1-201ENST00000450410 614 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AC021205.1-201ENST00000468797 348 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AL024509.2-201ENST00000493462 493 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AP001086.1-201ENST00000494882 321 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 COX6B1P6-201ENST00000522347 255 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGA1P17096 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HMGA1P17096 OR4H12P-201ENST00000556269 907 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGA1P17096 MIR5007-201ENST00000583098 95 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AC060766.3-201ENST00000591442 263 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AL356274.1-201ENST00000617064 410 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 SNORA50A-202ENST00000629536 136 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 AC093909.5-201ENST00000621839 1799 ntBASIC2.45□□□□□ -2.02
HMGA1P17096 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HMGA1P17096 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms