Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 OR5AP1P-201ENST00000529730 940 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AL360157.1-201ENST00000565962 87 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC090615.1-201ENST00000577519 154 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC097468.3-201ENST00000607956 456 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC133644.2-201ENST00000608142 540 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC103710.3-201ENST00000608157 948 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 VIS1.1-201ENST00000610517 203 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC012531.5-201ENST00000611375 151 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC008785.1-201ENST00000624475 456 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 NOL8P1-201ENST00000508336 3529 ntBASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHMP1AQ9HD42 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 MTND4P16-201ENST00000466108 1367 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNU6-744P-201ENST00000365557 107 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNU6-1316P-201ENST00000384242 108 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNY3P9-201ENST00000384727 106 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNA5SP332-201ENST00000391063 115 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 SNORD66.1-201ENST00000391230 76 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RPL23AP39-201ENST00000415533 405 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RAD23BP2-201ENST00000416003 1207 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AL445669.1-201ENST00000426743 755 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC011998.1-201ENST00000433403 117 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RSU1P2-202ENST00000437884 485 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC114495.1-201ENST00000441274 436 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 ARL2BPP10-201ENST00000446487 531 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC017015.1-201ENST00000477387 286 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC006517.1-201ENST00000480485 328 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC083982.1-201ENST00000485679 344 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 OR2A20P-203ENST00000498397 1268 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC111000.2-201ENST00000507775 550 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC034159.1-201ENST00000513885 583 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNU6-1095P-201ENST00000516148 108 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 RNU6-714P-201ENST00000516963 103 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC087373.1-201ENST00000524920 491 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC007954.1-201ENST00000554198 494 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC022916.3-201ENST00000592961 742 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC122133.1-201ENST00000613964 233 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AL391261.4-201ENST00000616012 481 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AL356585.4-201ENST00000623078 1229 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AC078883.4-201ENST00000623218 367 ntBASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHMP1AQ9HD42 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL645937.1-201ENST00000641739 1652 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL672167.1-206ENST00000356293 943 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RNA5SP167-201ENST00000365461 116 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MIR3065-201ENST00000390137 79 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL109941.1-201ENST00000401925 229 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RN7SKP266-201ENST00000410232 287 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 PGBD4P8-201ENST00000412993 562 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RPS15AP38-201ENST00000413110 372 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RPS7P15-201ENST00000415804 584 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MFSD13B-201ENST00000420133 1290 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms