Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC092681.1-201ENST00000297369 291 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 HSPE1P11-201ENST00000339579 310 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 Y_RNA.86-201ENST00000363020 111 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 RNU6-432P-201ENST00000384196 109 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 RNU6-74P-201ENST00000384235 107 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHDQ96IW2 RSU1P3-201ENST00000412878 835 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 IFNWP4-201ENST00000453148 294 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 RN7SL189P-201ENST00000468631 289 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 RN7SL319P-201ENST00000480656 221 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 IGLV2-34-201ENST00000490007 283 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AC022133.1-201ENST00000490961 571 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 NIFKP7-201ENST00000503365 834 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 GAPDHP56-201ENST00000506031 988 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC114797.1-201ENST00000514003 728 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 RNA5SP401-201ENST00000515920 127 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 SNORA70.11-201ENST00000515987 138 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 SNORA70.13-201ENST00000516116 138 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 RNU7-51P-201ENST00000516560 62 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC011712.1-201ENST00000588959 234 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AL669831.4-202ENST00000590817 238 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AP001521.2-201ENST00000608772 546 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.28□□□□□ -1.56
SHDQ96IW2 AL354950.2-201ENST00000617939 290 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHDQ96IW2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHDQ96IW2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.28□□□□□ -1.56
SHDQ96IW2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 AC093535.2-201ENST00000624769 2326 ntBASIC5.28□□□□□ -1.56
SHDQ96IW2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SHDQ96IW2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHDQ96IW2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHDQ96IW2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SHDQ96IW2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHDQ96IW2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.27□□□□□ -1.57
SHDQ96IW2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.27□□□□□ -1.57
SHDQ96IW2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SHDQ96IW2 SNORA70.2-201ENST00000364506 135 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 Y_RNA.548-201ENST00000384656 105 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHDQ96IW2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.27□□□□□ -1.57
SHDQ96IW2 RNA5SP56-201ENST00000410277 118 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AL391219.1-201ENST00000422570 483 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 CHIAP3-201ENST00000423668 1133 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC092651.1-201ENST00000426110 312 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC000374.1-201ENST00000434698 1745 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.27□□□□□ -1.57
SHDQ96IW2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.27□□□□□ -1.57
SHDQ96IW2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.27□□□□□ -1.57
SHDQ96IW2 AC234775.1-201ENST00000454247 670 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 snoU13.29-201ENST00000459370 104 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC078785.3-201ENST00000476607 425 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHDQ96IW2 AC068305.1-201ENST00000497406 726 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC020893.1-201ENST00000502452 580 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 PCBP2P3-201ENST00000509726 843 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.27□□□□□ -1.57
SHDQ96IW2 MTCO1P35-201ENST00000515270 228 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 MTCO1P24-201ENST00000515438 1558 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC103783.1-201ENST00000520506 373 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.27□□□□□ -1.57
SHDQ96IW2 CR383656.7-201ENST00000548164 174 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.27□□□□□ -1.57
SHDQ96IW2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.27□□□□□ -1.57
SHDQ96IW2 AC136624.4-201ENST00000573044 370 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.27□□□□□ -1.57
SHDQ96IW2 MIR5096-201ENST00000583713 70 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 C8orf59P2-201ENST00000603441 271 ntBASIC5.27□□□□□ -1.57
SHDQ96IW2 AL035413.2-201ENST00000604801 525 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms