Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC007159.1-201ENST00000566529 4706 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.152-201ENST00000363578 100 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 COX6B1P1-201ENST00000415962 213 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AL137014.1-201ENST00000420490 1226 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 EIF4EP1-201ENST00000422311 642 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 DDX39BP1-205ENST00000422507 192 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 PSMA6P3-201ENST00000428242 164 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 DYNLT3P2-201ENST00000442517 295 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 MED28P3-201ENST00000444288 531 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 OSTCP8-201ENST00000445117 448 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 SNORD127-201ENST00000458892 86 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC092754.1-201ENST00000472975 479 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.654-201ENST00000497848 106 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 FTH1P8-201ENST00000498161 514 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC092436.1-201ENST00000506450 503 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 SLC25A15P5-201ENST00000508033 253 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 RNU6-1023P-201ENST00000516137 106 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC018552.1-201ENST00000562099 811 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC234771.5-201ENST00000600161 514 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC091903.1-201ENST00000624322 454 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 MTND5P7-201ENST00000413558 1798 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 AC007996.1-201ENST00000620414 2821 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 KPNA2P2-201ENST00000419546 1489 ntBASIC6.79□□□□□ -1.32
RC3H1Q5TC82 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RC3H1Q5TC82 DDX18P4-201ENST00000511690 1966 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 MFSD8-216ENST00000641147 4009 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC010615.1-201ENST00000594254 1764 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC005725.1-201ENST00000577346 2607 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.60-201ENST00000362831 98 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RNU6-450P-201ENST00000364654 107 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RNU6-593P-201ENST00000364716 112 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RHOT1P2-201ENST00000366423 333 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RNU6-746P-201ENST00000384112 109 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 MIR600-201ENST00000385007 98 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 MIR105-1-201ENST00000385222 81 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RNU6-823P-201ENST00000391042 103 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AL360182.1-201ENST00000397433 468 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RNU2-29P-201ENST00000410423 189 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 MTCO3P19-201ENST00000415864 321 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 OR2AM1P-201ENST00000422137 422 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 PIGPP3-201ENST00000425307 415 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RPL21P91-201ENST00000429231 479 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC104332.1-201ENST00000440471 797 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AL121871.1-201ENST00000443413 436 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 OR1H1P-201ENST00000448731 937 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RPS29P15-201ENST00000458329 171 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RPL23AP12-201ENST00000467573 473 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC012123.2-201ENST00000485809 248 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 RNU6-699P-201ENST00000517081 110 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC090136.1-201ENST00000520009 240 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 NPM1P42-201ENST00000560329 862 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 MIR3146-201ENST00000580367 79 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC023043.2-201ENST00000589678 1026 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC018809.2-201ENST00000602436 3823 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC104662.1-201ENST00000604448 511 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AL354984.3-201ENST00000604803 325 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AC096772.1-201ENST00000609146 564 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 MIR378J-201ENST00000611988 109 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 AL731566.2-201ENST00000618971 317 ntBASIC6.78□□□□□ -1.32
RC3H1Q5TC82 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RC3H1Q5TC82 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms