Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC093908.1-201ENST00000623125 8092 ntBASIC2.6□□□□□ -1.99
HTTP42858 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HTTP42858 AL035551.1-201ENST00000446931 348 ntBASIC2.6□□□□□ -1.99
HTTP42858 RPS6P2-201ENST00000454208 705 ntBASIC2.6□□□□□ -1.99
HTTP42858 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.6□□□□□ -1.99
HTTP42858 AC119751.1-201ENST00000513357 765 ntBASIC2.6□□□□□ -1.99
HTTP42858 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.6□□□□□ -1.99
HTTP42858 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
HTTP42858 AC008083.2-201ENST00000546707 476 ntBASIC2.6□□□□□ -1.99
HTTP42858 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.6□□□□□ -1.99
HTTP42858 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HTTP42858 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HTTP42858 MIR148B-201ENST00000362252 99 ntBASIC2.6□□□□□ -1.99
HTTP42858 Y_RNA.112-201ENST00000363250 102 ntBASIC2.6□□□□□ -1.99
HTTP42858 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.6□□□□□ -1.99
HTTP42858 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.6□□□□□ -1.99
HTTP42858 ELOCP13-201ENST00000443934 329 ntBASIC2.6□□□□□ -1.99
HTTP42858 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.6□□□□□ -1.99
HTTP42858 KCTD9P5-201ENST00000504141 1170 ntBASIC2.6□□□□□ -1.99
HTTP42858 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
HTTP42858 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HTTP42858 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HTTP42858 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.59□□□□□ -1.99
HTTP42858 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HTTP42858 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.59□□□□□ -1.99
HTTP42858 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.59□□□□□ -1.99
HTTP42858 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.59□□□□□ -1.99
HTTP42858 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HTTP42858 PHKBP1-201ENST00000450951 1951 ntBASIC2.59□□□□□ -1.99
HTTP42858 MTND5P19-201ENST00000424872 1794 ntBASIC2.59□□□□□ -1.99
HTTP42858 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HTTP42858 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.59□□□□□ -1.99
HTTP42858 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
HTTP42858 AL445646.1-201ENST00000431784 216 ntBASIC2.59□□□□□ -1.99
HTTP42858 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
HTTP42858 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
HTTP42858 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.59□□□□□ -1.99
HTTP42858 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.59□□□□□ -1.99
HTTP42858 AC103968.1-201ENST00000557841 573 ntBASIC2.59□□□□□ -1.99
HTTP42858 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HTTP42858 AC027514.1-201ENST00000588561 1603 ntBASIC2.59□□□□□ -1.99
HTTP42858 AC025125.1-201ENST00000624743 1922 ntBASIC2.59□□□□□ -2
HTTP42858 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.59□□□□□ -2
HTTP42858 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -2
HTTP42858 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HTTP42858 RNA5SP480-201ENST00000516840 109 ntBASIC2.59□□□□□ -2
HTTP42858 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.59□□□□□ -2
HTTP42858 AC128687.1-201ENST00000605304 619 ntBASIC2.59□□□□□ -2
HTTP42858 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.59□□□□□ -2
HTTP42858 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HTTP42858 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HTTP42858 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HTTP42858 AL583834.1-201ENST00000406943 343 ntBASIC2.58□□□□□ -2
HTTP42858 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.58□□□□□ -2
HTTP42858 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.58□□□□□ -2
HTTP42858 AC105402.2-201ENST00000438503 358 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.6-201ENST00000603753 252 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.11-201ENST00000604059 253 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.10-201ENST00000604330 253 ntBASIC2.58□□□□□ -2
HTTP42858 AC008162.1-201ENST00000604718 254 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.1-201ENST00000604752 252 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.2-201ENST00000604983 252 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.5-201ENST00000605253 252 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.4-201ENST00000605279 254 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.12-201ENST00000605291 253 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.8-201ENST00000605353 252 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.9-201ENST00000605428 253 ntBASIC2.58□□□□□ -2
HTTP42858 AL670379.7-201ENST00000605823 252 ntBASIC2.58□□□□□ -2
HTTP42858 AC010480.1-201ENST00000624823 684 ntBASIC2.58□□□□□ -2
HTTP42858 AC020633.1-201ENST00000468439 2247 ntBASIC2.58□□□□□ -2
HTTP42858 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.58□□□□□ -2
HTTP42858 RNU6-805P-201ENST00000365643 106 ntBASIC2.58□□□□□ -2
HTTP42858 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
HTTP42858 AC013410.1-201ENST00000436223 1232 ntBASIC2.58□□□□□ -2
HTTP42858 AP005136.1-201ENST00000579765 429 ntBASIC2.58□□□□□ -2
HTTP42858 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.58□□□□□ -2
HTTP42858 AL360085.1-201ENST00000604713 532 ntBASIC2.58□□□□□ -2
HTTP42858 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HTTP42858 AC004825.2-201ENST00000616634 455 ntBASIC2.58□□□□□ -2
HTTP42858 YWHAEP7-203ENST00000622054 312 ntBASIC2.58□□□□□ -2
HTTP42858 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HTTP42858 AC107027.3-201ENST00000565095 3473 ntBASIC2.57□□□□□ -2
HTTP42858 NPM1P38-201ENST00000403835 865 ntBASIC2.57□□□□□ -2
HTTP42858 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
HTTP42858 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.57□□□□□ -2
HTTP42858 AC087385.1-201ENST00000475062 312 ntBASIC2.57□□□□□ -2
HTTP42858 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HTTP42858 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
HTTP42858 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.57□□□□□ -2
HTTP42858 AC083760.1-201ENST00000589621 670 ntBASIC2.57□□□□□ -2
HTTP42858 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.57□□□□□ -2
HTTP42858 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HTTP42858 AC092045.1-201ENST00000495716 1231 ntBASIC2.57□□□□□ -2
HTTP42858 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.57□□□□□ -2
HTTP42858 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HTTP42858 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
HTTP42858 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.57□□□□□ -2
HTTP42858 HMGB3P23-201ENST00000414981 585 ntBASIC2.57□□□□□ -2
HTTP42858 AL020991.1-201ENST00000612314 373 ntBASIC2.57□□□□□ -2
HTTP42858 BX005019.1-201ENST00000561881 1810 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms