Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RPL36AP51-201ENST00000487216 318 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 AC096576.1-201ENST00000489014 359 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGN4O00479 AP003467.2-201ENST00000520175 319 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGN4O00479 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGN4O00479 SERPINE4P-201ENST00000554978 281 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGN4O00479 AC007423.1-201ENST00000605009 627 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 AC067747.1-201ENST00000608026 250 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 AL137847.3-201ENST00000611521 109 ntBASIC2.25□□□□□ -2.05
HMGN4O00479 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HMGN4O00479 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
HMGN4O00479 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGN4O00479 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
HMGN4O00479 AL355578.1-201ENST00000607405 1328 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGN4O00479 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGN4O00479 RNU6-761P-201ENST00000384148 107 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 MIR196B-201ENST00000384852 84 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 RPL31P52-201ENST00000407532 367 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 RNA5SP184-201ENST00000411071 108 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGN4O00479 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HMGN4O00479 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 AL109933.2-201ENST00000452651 260 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGN4O00479 AC092754.2-201ENST00000463506 460 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGN4O00479 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGN4O00479 AC010627.1-201ENST00000503819 1294 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 AC112673.1-201ENST00000513168 575 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGN4O00479 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGN4O00479 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 FAM106CP-201ENST00000582212 507 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGN4O00479 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HMGN4O00479 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
HMGN4O00479 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGN4O00479 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGN4O00479 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 MIR591-201ENST00000385290 95 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 SAR1AP2-201ENST00000392696 594 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 SNORA11.1-201ENST00000408133 129 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 MTND4LP21-201ENST00000415303 295 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HMGN4O00479 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HMGN4O00479 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HMGN4O00479 RPS3P1-201ENST00000456781 192 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 RPS27AP1-201ENST00000475545 471 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 UBTFL10-201ENST00000528532 562 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGN4O00479 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.23□□□□□ -2.05
HMGN4O00479 AC005156.1-201ENST00000613371 573 ntBASIC2.23□□□□□ -2.05
HMGN4O00479 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGN4O00479 Z82195.2-201ENST00000612348 18351 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGN4O00479 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 RNA5SP68-201ENST00000363885 119 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 RNU4-7P-201ENST00000364758 141 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGN4O00479 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGN4O00479 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 RPS24P8-201ENST00000431490 402 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 OR6C71P-201ENST00000432580 913 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 RSL24D1P2-201ENST00000445584 366 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGN4O00479 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGN4O00479 RPL5P23-201ENST00000496040 868 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGN4O00479 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 MTND5P4-201ENST00000514978 288 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 RNA5SP402-201ENST00000517148 110 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 RPL12P22-201ENST00000519073 490 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 AP004242.1-201ENST00000533701 349 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGN4O00479 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGN4O00479 OR4T1P-201ENST00000554933 911 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGN4O00479 AC067852.4-201ENST00000590314 478 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 MIR6817-201ENST00000615588 66 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
HMGN4O00479 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.22□□□□□ -2.05
HMGN4O00479 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
HMGN4O00479 AC092435.3-201ENST00000565538 3654 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HMGN4O00479 MIR92A2-201ENST00000385299 75 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 AL354719.1-201ENST00000406535 843 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms