Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TCRBV3S1A0A5B6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC012321.1-201ENST00000561622 1588 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 SNORA51.2-201ENST00000364595 132 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 RNU6-356P-201ENST00000384140 107 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 SNORA41-201ENST00000384675 132 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 MIR9-1-201ENST00000385198 89 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 UBA52P6-201ENST00000399822 382 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AL138885.1-201ENST00000405921 675 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 RAB28P1-201ENST00000411517 641 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AL389915.1-201ENST00000422463 466 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 RPL34P26-201ENST00000445636 354 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AP002812.1-201ENST00000495378 474 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC026427.2-201ENST00000506228 536 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC128657.1-201ENST00000549459 145 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC006023.2-201ENST00000609916 167 ntBASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV3S1A0A5B6 AC087565.3-202ENST00000642085 1603 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 RNU1-138P-201ENST00000384093 164 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 MIR449B-201ENST00000384995 97 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AL158825.1-201ENST00000414735 521 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 USP9YP27-201ENST00000418455 438 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC069157.1-201ENST00000421749 137 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 SNORA31.21-201ENST00000517180 77 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AP003102.1-201ENST00000525638 661 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 HSPE1P20-201ENST00000538133 289 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 OR4U1P-201ENST00000554958 912 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC105036.1-201ENST00000566222 271 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC138761.3-201ENST00000579993 334 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC007448.1-201ENST00000582714 234 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC008687.2-201ENST00000597865 520 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 MTND5P3-201ENST00000438536 1800 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 ZNF33CP-201ENST00000432492 2030 ntBASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV3S1A0A5B6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 SNORA7.2-201ENST00000364446 145 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC025750.1-201ENST00000399891 379 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 RN7SKP222-201ENST00000410651 315 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC073508.1-201ENST00000428866 656 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC087499.2-201ENST00000432861 149 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 XKRYP6-201ENST00000440468 1116 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 XKRYP3-201ENST00000442113 1116 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AIG1P1-201ENST00000503376 148 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 OR4R2P-201ENST00000530815 597 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 RPL12P50-201ENST00000603116 116 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC015849.6-201ENST00000605454 474 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AL390240.1-201ENST00000612950 384 ntBASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV3S1A0A5B6 MAPK10-266ENST00000641066 6555 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RPL21P132-201ENST00000331267 462 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RNU1-109P-201ENST00000383960 147 ntBASIC2.3□□□□□ -2.04
TCRBV3S1A0A5B6 RNVU1-14-201ENST00000384770 164 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms