Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 OR2AH1P-201ENST00000425717 928 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC004938.1-201ENST00000438468 308 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC069528.1-202ENST00000482888 637 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 RPL35P6-201ENST00000490024 372 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 RN7SL812P-201ENST00000493791 279 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 OR4A12P-201ENST00000530847 918 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 HNRNPCP4-201ENST00000571636 900 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AL009028.1-201ENST00000604895 802 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 OR8G7P-201ENST00000616658 848 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC008121.3-201ENST00000618726 433 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC012442.3-202ENST00000636742 206 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CPHL1P-201ENST00000461341 3407 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AL022578.1-201ENST00000439330 1433 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 AC092111.2-201ENST00000611627 1414 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 OR4G11P-202ENST00000642116 1414 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 OR10AB1P-202ENST00000641219 1686 ntBASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NOTCH3Q9UM47 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 Y_RNA.311-201ENST00000365068 96 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 Y_RNA.460-201ENST00000384255 102 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RNU6-1160P-201ENST00000384546 104 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 CYCSP45-201ENST00000402289 315 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 USP9YP27-201ENST00000418455 438 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL157831.1-201ENST00000426134 473 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 TIMM9P3-201ENST00000428659 274 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 GOT2P5-201ENST00000433995 546 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 MTND3P2-201ENST00000438452 342 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 OR9M1P-201ENST00000459641 921 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RPL5P24-201ENST00000463742 885 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RPL7P18-201ENST00000478965 734 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 PPP1R11P1-201ENST00000486095 376 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL359219.2-201ENST00000555184 348 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 MIR3913-1-201ENST00000577744 102 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL121772.2-201ENST00000614331 297 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL133370.2-201ENST00000619934 439 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC015722.2-201ENST00000622210 551 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 FAM157B-203ENST00000639350 358 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AP001157.1-201ENST00000550837 2339 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 MTCO1P23-201ENST00000415223 1526 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RNU6-780P-201ENST00000391030 104 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC062016.2-201ENST00000420950 676 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL139421.1-201ENST00000423010 169 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 USP9YP36-201ENST00000424581 829 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL009174.1-201ENST00000426577 416 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 MTCO1P54-201ENST00000430139 712 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL365400.1-201ENST00000431854 640 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 ARL5AP2-201ENST00000444698 533 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC019235.1-201ENST00000503847 207 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 HMGB3P16-201ENST00000508037 287 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms