Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 BX842559.1-201ENST00000419615 532 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 RPL7P28-201ENST00000437739 740 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 Z77249.1-201ENST00000444622 1175 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC104164.3-201ENST00000467363 1258 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC084357.1-201ENST00000473404 255 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC109925.1-201ENST00000478069 331 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC118465.1-201ENST00000513820 1271 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 UBE2NP1-201ENST00000545592 458 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC093519.1-201ENST00000566109 298 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 MIR5708-201ENST00000579723 85 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 MIR3162-201ENST00000581818 82 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 RNA5SP126-201ENST00000365092 109 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 SNORA44-201ENST00000384584 132 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AL357075.1-201ENST00000404107 726 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 OR1AA1P-201ENST00000419597 916 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 COTL1P1-201ENST00000422309 375 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 IFNNP1-201ENST00000429219 553 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 MOB1AP1-201ENST00000430903 535 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 HMGB1P16-201ENST00000447155 540 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC099563.1-201ENST00000456086 418 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC069528.1-202ENST00000482888 637 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC069499.1-201ENST00000489433 509 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC093755.1-201ENST00000512950 1023 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC018797.3-201ENST00000513388 1241 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC233702.9-201ENST00000581528 203 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC091057.3-201ENST00000602684 733 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 LLPHP1-201ENST00000603571 367 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC073657.2-201ENST00000605661 303 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 OR6R2P-201ENST00000609216 300 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC233309.1-201ENST00000619522 751 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 MTCO1P24-201ENST00000515438 1558 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 AL645937.1-201ENST00000641739 1652 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 SAGE4P-201ENST00000442271 3381 ntBASIC6.62□□□□□ -1.35
SHROOM4Q9ULL8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 RNU6-582P-201ENST00000362989 107 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC013410.2-201ENST00000422627 201 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AL158071.1-201ENST00000430315 461 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 RPL5P30-201ENST00000465511 891 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC146507.1-201ENST00000468335 354 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 RNF138P1-201ENST00000502765 546 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC109458.1-201ENST00000508858 316 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC087276.1-201ENST00000529659 480 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AL451007.1-201ENST00000595491 289 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC009237.15-201ENST00000610252 501 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AC098679.5-201ENST00000624394 571 ntBASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM4Q9ULL8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 SNORD116-23-201ENST00000384645 92 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AL133264.1-201ENST00000407157 562 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC106883.1-201ENST00000418805 562 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 Z93242.1-201ENST00000427102 353 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC092393.1-201ENST00000439625 742 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC010301.1-201ENST00000473936 355 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 RPL21P131-201ENST00000497298 483 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 RNU6-579P-201ENST00000516879 102 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 MTCYBP23-201ENST00000558717 1102 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AL139395.1-201ENST00000603662 160 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC011458.1-201ENST00000604034 617 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AL365400.2-201ENST00000605604 902 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 AC068722.2-201ENST00000618734 544 ntBASIC6.6□□□□□ -1.35
SHROOM4Q9ULL8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms