Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 U3.11-201ENST00000364476 212 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 RNU6-1013P-201ENST00000384180 107 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 MIR589-201ENST00000385238 99 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 RNU2-29P-201ENST00000410423 189 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 Z82198.3-201ENST00000421145 199 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AL035660.1-201ENST00000422041 222 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 RPL31P12-201ENST00000422587 358 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC234779.1-201ENST00000425910 285 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC110602.1-201ENST00000437414 318 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 snoU13.8-201ENST00000458890 104 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 RPS23P6-201ENST00000466136 431 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 RPL7P43-201ENST00000478876 753 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 RN7SL568P-201ENST00000493069 298 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC116562.3-201ENST00000506136 177 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 RNU6-566P-201ENST00000516790 107 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC068587.5-201ENST00000528506 175 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AP000857.1-201ENST00000532151 543 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AP000889.2-201ENST00000532684 490 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 MIR4703-201ENST00000577728 79 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 MIR5583-1-201ENST00000580941 59 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 RN7SL435P-201ENST00000584418 282 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 MIR3149-201ENST00000584629 83 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 7SK.7-201ENST00000603504 247 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AL031666.3-201ENST00000609320 1006 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC015914.2-201ENST00000618167 288 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC111152.1-202ENST00000635848 339 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSU72Q9NP77 STX3-208ENST00000641815 3236 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSU72Q9NP77 LINC02019-201ENST00000608605 2060 ntBASIC5.33□□□□□ -1.56
SSU72Q9NP77 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.33□□□□□ -1.56
SSU72Q9NP77 AC104966.1-201ENST00000467010 1464 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSU72Q9NP77 COX6B1P3-201ENST00000312310 260 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 RPL32P3-201ENST00000359025 275 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 Y_RNA.148-201ENST00000363557 117 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 RNU6-1188P-201ENST00000363795 107 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 RNU6-505P-201ENST00000384427 107 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 UBE2V1P2-201ENST00000397758 440 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 MIR548F4-201ENST00000408515 105 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 GSTM3P2-201ENST00000412746 530 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC074085.1-201ENST00000413598 418 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 NUP35P1-201ENST00000422734 947 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 OR2AS1P-201ENST00000427827 319 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 RPL12P18-201ENST00000437175 325 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 RPL35AP21-201ENST00000437667 333 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL356121.1-201ENST00000442911 156 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC107399.1-201ENST00000451226 265 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC016724.1-201ENST00000453215 421 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 ELOCP24-201ENST00000456370 334 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL162395.1-201ENST00000457882 422 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 HMGB1P21-201ENST00000502313 581 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 RNU6-273P-201ENST00000516937 96 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 HMGB1P41-201ENST00000520234 440 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC112191.2-201ENST00000522428 333 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 EIF4A2P5-201ENST00000529914 499 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 BNIP3P1-201ENST00000547295 580 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC011626.1-201ENST00000604710 562 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL592436.1-201ENST00000605135 558 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 RMST_9.1-201ENST00000619945 193 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC011155.2-201ENST00000623202 216 ntBASIC5.32□□□□□ -1.56
SSU72Q9NP77 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.32□□□□□ -1.56
SSU72Q9NP77 AL672167.1-204ENST00000641875 3017 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms