Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SCARNA20.4-201ENST00000516969 131 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 NARSP2-201ENST00000518524 679 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 RN7SL356P-201ENST00000582228 248 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 MIR3149-201ENST00000584629 83 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 AC245389.1-201ENST00000605141 529 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 AC087588.2-201ENST00000617667 426 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 AC119674.1-207ENST00000641355 633 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 AC012618.3-205ENST00000637896 1496 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 AC092747.4-201ENST00000620519 1861 ntBASIC6.58□□□□□ -1.36
CCDC85AQ96PX6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 U3.12-201ENST00000364498 214 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 Y_RNA.339-201ENST00000365325 102 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 Y_RNA.452-201ENST00000384202 108 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 U3.20-201ENST00000390909 217 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC009310.1-201ENST00000414414 451 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 PMCHL1-202ENST00000423102 261 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC005517.2-201ENST00000424673 553 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 RNU7-182P-201ENST00000459009 62 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC083904.1-201ENST00000487828 231 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 RPL39P5-202ENST00000512505 151 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC018797.3-201ENST00000513388 1241 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 RN7SKP219-201ENST00000516825 296 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC110588.1-201ENST00000559699 137 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AL512782.1-201ENST00000603093 364 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AL355816.1-201ENST00000607951 118 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AL138960.1-201ENST00000613838 513 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC007546.1-201ENST00000619452 559 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 uc_338.22-201ENST00000622722 187 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AP001784.1-201ENST00000624107 428 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 AC011460.1-201ENST00000636268 1834 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 MTND4P14-201ENST00000435799 1354 ntBASIC6.57□□□□□ -1.36
CCDC85AQ96PX6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 RNA5SP455-201ENST00000365190 119 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 RNU6-1207P-201ENST00000384343 107 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC074085.1-201ENST00000413598 418 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AL138799.3-201ENST00000438968 350 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 NANOGP10-201ENST00000453325 895 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 snoU13.8-201ENST00000458890 104 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AL049714.1-201ENST00000466686 347 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 RPL21P6-201ENST00000479171 504 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC091912.1-201ENST00000511351 248 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 SMURF2P1-201ENST00000514992 481 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AL117187.1-201ENST00000555482 181 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 MIR4503-201ENST00000582187 83 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC090425.1-201ENST00000610007 140 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC244107.2-201ENST00000611773 76 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AL359757.2-201ENST00000624309 274 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 AC135068.12-201ENST00000637370 931 ntBASIC6.56□□□□□ -1.36
CCDC85AQ96PX6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms