Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AP003117.1-201ENST00000602771 554 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.11□□□□□ -2.07
SSBP1Q04837 LLPHP1-201ENST00000603571 367 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 RNA5SP108-201ENST00000605921 117 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 AC105429.2-201ENST00000610567 517 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 AC016717.3-201ENST00000624730 554 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SSBP1Q04837 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SSBP1Q04837 AC005336.3-201ENST00000623833 2679 ntBASIC2.11□□□□□ -2.07
SSBP1Q04837 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SSBP1Q04837 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.1□□□□□ -2.07
SSBP1Q04837 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SSBP1Q04837 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 MIR422A-201ENST00000362286 90 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 RNU1-112P-201ENST00000364401 164 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 MIR144-201ENST00000384886 86 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 MIR153-1-201ENST00000384914 90 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 EEF1A1P41-201ENST00000414667 207 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 RPL36AP36-201ENST00000418616 301 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.1□□□□□ -2.07
SSBP1Q04837 UBE2V1P1-201ENST00000430836 445 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AL139132.1-201ENST00000431587 344 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AC093716.1-201ENST00000435923 377 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 H2AFZP6-201ENST00000444403 394 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.1□□□□□ -2.07
SSBP1Q04837 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 AC012181.1-201ENST00000479895 423 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.1□□□□□ -2.07
SSBP1Q04837 VN1R104P-201ENST00000505115 1009 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 HIGD1AP13-201ENST00000509878 289 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AC023632.4-201ENST00000517783 191 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.1□□□□□ -2.07
SSBP1Q04837 OR4R2P-201ENST00000530815 597 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.1□□□□□ -2.07
SSBP1Q04837 AC010928.3-201ENST00000587712 541 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AC091057.2-201ENST00000602594 792 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 RPL12P50-201ENST00000603116 116 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 AC019131.2-201ENST00000609071 870 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.1□□□□□ -2.07
SSBP1Q04837 AC121761.2-201ENST00000617300 689 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.1□□□□□ -2.07
SSBP1Q04837 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
SSBP1Q04837 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 AP000526.1-201ENST00000603308 1388 ntBASIC2.1□□□□□ -2.07
SSBP1Q04837 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP1Q04837 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
SSBP1Q04837 CUL1P1-201ENST00000509510 2425 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SSBP1Q04837 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SSBP1Q04837 RPL21P132-201ENST00000331267 462 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 SNORA38.1-201ENST00000364172 131 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 RNA5SP189-201ENST00000364920 115 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 DHFRP5-201ENST00000406944 564 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AL158825.1-201ENST00000414735 521 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 FNDC3CP-201ENST00000420795 1155 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.09□□□□□ -2.07
SSBP1Q04837 AC087499.2-201ENST00000432861 149 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.09□□□□□ -2.07
SSBP1Q04837 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SSBP1Q04837 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.09□□□□□ -2.07
SSBP1Q04837 PRDX3P3-201ENST00000447765 522 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.09□□□□□ -2.07
SSBP1Q04837 VN1R17P-201ENST00000472048 1090 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.09□□□□□ -2.07
SSBP1Q04837 RPS29P26-201ENST00000477483 171 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 LARP7P4-201ENST00000481075 878 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AC023424.2-201ENST00000493479 777 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.09□□□□□ -2.07
SSBP1Q04837 AC026427.2-201ENST00000506228 536 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.09□□□□□ -2.07
SSBP1Q04837 OR5AK3P-201ENST00000527486 1297 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.09□□□□□ -2.07
SSBP1Q04837 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.09□□□□□ -2.07
SSBP1Q04837 CKS1BP1-201ENST00000555221 240 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.09□□□□□ -2.07
SSBP1Q04837 AC234775.3-201ENST00000564612 656 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 YPEL5P2-201ENST00000605553 359 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AC067747.1-201ENST00000608026 250 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AC090425.2-201ENST00000608818 501 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 AL592494.3-201ENST00000609485 464 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 uc_338.9-201ENST00000617424 182 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 FO624990.1-201ENST00000636373 85 ntBASIC2.09□□□□□ -2.07
SSBP1Q04837 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SSBP1Q04837 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SSBP1Q04837 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SSBP1Q04837 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
SSBP1Q04837 AC092435.3-201ENST00000565538 3654 ntBASIC2.09□□□□□ -2.08
SSBP1Q04837 AL157700.1-201ENST00000561973 1432 ntBASIC2.08□□□□□ -2.08
SSBP1Q04837 AC080100.1-201ENST00000624239 5356 ntBASIC2.08□□□□□ -2.08
SSBP1Q04837 AC010733.2-201ENST00000589496 5702 ntBASIC2.08□□□□□ -2.08
SSBP1Q04837 MIR21-201ENST00000362134 72 ntBASIC2.08□□□□□ -2.08
SSBP1Q04837 SNORD62.1-201ENST00000362541 86 ntBASIC2.08□□□□□ -2.08
SSBP1Q04837 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.08□□□□□ -2.08
SSBP1Q04837 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms