Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.56□□□□□ -1.68
COPAP53621 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.56□□□□□ -1.68
COPAP53621 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COPAP53621 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
COPAP53621 AL022578.1-201ENST00000439330 1433 ntBASIC4.55□□□□□ -1.68
COPAP53621 CPHL1P-201ENST00000461341 3407 ntBASIC4.55□□□□□ -1.68
COPAP53621 PABPC1P9-201ENST00000426076 1612 ntBASIC4.55□□□□□ -1.68
COPAP53621 RPL23AP57-201ENST00000332361 466 ntBASIC4.55□□□□□ -1.68
COPAP53621 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COPAP53621 RNU6-289P-201ENST00000364093 107 ntBASIC4.55□□□□□ -1.68
COPAP53621 RN7SKP227-201ENST00000364445 330 ntBASIC4.55□□□□□ -1.68
COPAP53621 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.55□□□□□ -1.68
COPAP53621 AL031679.1-201ENST00000400616 525 ntBASIC4.55□□□□□ -1.68
COPAP53621 AL121834.1-202ENST00000404494 277 ntBASIC4.55□□□□□ -1.68
COPAP53621 MTCO3P41-201ENST00000414801 328 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC006366.1-201ENST00000422002 759 ntBASIC4.55□□□□□ -1.68
COPAP53621 RPS12P10-201ENST00000427031 377 ntBASIC4.55□□□□□ -1.68
COPAP53621 MTCO1P19-201ENST00000443487 500 ntBASIC4.55□□□□□ -1.68
COPAP53621 RPL23AP43-201ENST00000446445 471 ntBASIC4.55□□□□□ -1.68
COPAP53621 RPL29P29-201ENST00000448725 423 ntBASIC4.55□□□□□ -1.68
COPAP53621 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.55□□□□□ -1.68
COPAP53621 PAXBP1P1-201ENST00000449315 447 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.55□□□□□ -1.68
COPAP53621 RPL5P32-201ENST00000454085 879 ntBASIC4.55□□□□□ -1.68
COPAP53621 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 RN7SL98P-201ENST00000462271 300 ntBASIC4.55□□□□□ -1.68
COPAP53621 AP000873.1-201ENST00000463987 400 ntBASIC4.55□□□□□ -1.68
COPAP53621 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.55□□□□□ -1.68
COPAP53621 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.55□□□□□ -1.68
COPAP53621 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.55□□□□□ -1.68
COPAP53621 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.55□□□□□ -1.68
COPAP53621 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.55□□□□□ -1.68
COPAP53621 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.55□□□□□ -1.68
COPAP53621 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.55□□□□□ -1.68
COPAP53621 IGHV3-32-201ENST00000519182 355 ntBASIC4.55□□□□□ -1.68
COPAP53621 MTCYBP20-201ENST00000524239 1129 ntBASIC4.55□□□□□ -1.68
COPAP53621 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.55□□□□□ -1.68
COPAP53621 AL109766.1-201ENST00000555080 552 ntBASIC4.55□□□□□ -1.68
COPAP53621 MIR3611-201ENST00000584484 83 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.55□□□□□ -1.68
COPAP53621 OR4G1P-201ENST00000588632 938 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.55□□□□□ -1.68
COPAP53621 BNIP3P23-201ENST00000599655 511 ntBASIC4.55□□□□□ -1.68
COPAP53621 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 AC020634.1-201ENST00000608701 549 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC006065.5-201ENST00000623427 349 ntBASIC4.55□□□□□ -1.68
COPAP53621 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.55□□□□□ -1.68
COPAP53621 AL392088.2-201ENST00000637607 285 ntBASIC4.55□□□□□ -1.68
COPAP53621 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 SAGE4P-201ENST00000442271 3381 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.55□□□□□ -1.68
COPAP53621 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.55□□□□□ -1.68
COPAP53621 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.55□□□□□ -1.68
COPAP53621 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.55□□□□□ -1.68
COPAP53621 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPAP53621 AL356473.1-201ENST00000406203 1408 ntBASIC4.55□□□□□ -1.68
COPAP53621 AC105074.1-201ENST00000623380 3095 ntBASIC4.54□□□□□ -1.68
COPAP53621 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COPAP53621 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.54□□□□□ -1.68
COPAP53621 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPAP53621 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.54□□□□□ -1.68
COPAP53621 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPAP53621 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COPAP53621 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPAP53621 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
COPAP53621 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
COPAP53621 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COPAP53621 OR5H15-201ENST00000383696 930 ntBASIC4.54□□□□□ -1.68
COPAP53621 RNU6-952P-201ENST00000391164 108 ntBASIC4.54□□□□□ -1.68
COPAP53621 RPL31P1-201ENST00000398116 372 ntBASIC4.54□□□□□ -1.68
COPAP53621 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.54□□□□□ -1.68
COPAP53621 TPMTP2-201ENST00000414372 726 ntBASIC4.54□□□□□ -1.68
COPAP53621 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.54□□□□□ -1.68
COPAP53621 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
COPAP53621 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.54□□□□□ -1.68
COPAP53621 CYCSP46-201ENST00000423569 204 ntBASIC4.54□□□□□ -1.68
COPAP53621 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPAP53621 AL365184.2-201ENST00000431139 435 ntBASIC4.54□□□□□ -1.68
COPAP53621 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.54□□□□□ -1.68
COPAP53621 AC011998.1-201ENST00000433403 117 ntBASIC4.54□□□□□ -1.68
COPAP53621 TRIM60P18-201ENST00000441518 828 ntBASIC4.54□□□□□ -1.68
COPAP53621 BMI1P1-201ENST00000445879 941 ntBASIC4.54□□□□□ -1.68
COPAP53621 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.54□□□□□ -1.68
COPAP53621 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.54□□□□□ -1.68
COPAP53621 AC053481.1-201ENST00000467217 306 ntBASIC4.54□□□□□ -1.68
COPAP53621 AC022034.3-201ENST00000471393 478 ntBASIC4.54□□□□□ -1.68
COPAP53621 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.54□□□□□ -1.68
COPAP53621 AC093809.1-201ENST00000509155 340 ntBASIC4.54□□□□□ -1.68
COPAP53621 PPBPP1-201ENST00000510807 373 ntBASIC4.54□□□□□ -1.68
COPAP53621 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.54□□□□□ -1.68
COPAP53621 MTCO2P32-201ENST00000514865 403 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms