Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXD13P35453 NANOGP10-201ENST00000453325 895 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 RPL18AP17-201ENST00000455326 198 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 SUMO2P2-201ENST00000456482 255 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 U8.18-201ENST00000459285 133 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 TMED11P-201ENST00000479478 690 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 RPL7P38-201ENST00000488396 739 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXD13P35453 AC006390.1-201ENST00000508068 283 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 RNA5SP309-201ENST00000516670 106 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AC104986.1-201ENST00000517978 436 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 OR5D17P-201ENST00000531492 978 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXD13P35453 AL121603.1-201ENST00000553815 142 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD13P35453 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD13P35453 MIR5186-201ENST00000577504 120 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 MIR4286-201ENST00000580651 93 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AC022916.3-201ENST00000592961 742 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXD13P35453 VN1R85P-201ENST00000601587 426 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 AL049634.3-201ENST00000604968 457 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 MIR486-1-201ENST00000612171 68 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXD13P35453 AC116618.1-201ENST00000634617 774 ntBASIC4.14□□□□□ -1.75
HOXD13P35453 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXD13P35453 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXD13P35453 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXD13P35453 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 AL356473.1-201ENST00000406203 1408 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 AC095050.2-201ENST00000510748 1458 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD13P35453 AP001350.1-201ENST00000601906 1524 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 RNU6-621P-201ENST00000364752 109 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXD13P35453 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD13P35453 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD13P35453 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC019178.2-201ENST00000423595 505 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 NDUFB1P1-201ENST00000435191 180 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 Z80107.1-201ENST00000436830 412 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD13P35453 FAM172BP-201ENST00000487497 1089 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC108729.1-201ENST00000487812 947 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC090453.1-201ENST00000495560 436 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 AC020699.1-201ENST00000505161 445 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC004069.2-201ENST00000505438 1114 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC020593.1-201ENST00000507399 299 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC109635.4-202ENST00000531666 412 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD13P35453 TOMM20P2-201ENST00000540082 421 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 CYCSP30-201ENST00000546447 172 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC010198.2-201ENST00000550612 259 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 HSPE1P5-201ENST00000561489 272 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD13P35453 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 MAGOH2P-202ENST00000584384 429 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD13P35453 AC007687.1-201ENST00000602704 304 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC010738.1-201ENST00000604970 987 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC007349.4-201ENST00000608114 532 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC006023.2-201ENST00000609916 167 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC024941.1-201ENST00000612250 334 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC006963.1-201ENST00000624003 1052 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC231657.1-201ENST00000624313 397 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC091905.1-201ENST00000624400 311 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 AC006927.4-201ENST00000639187 543 ntBASIC4.13□□□□□ -1.75
HOXD13P35453 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD13P35453 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD13P35453 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 AC024560.2-201ENST00000507981 1497 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD13P35453 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD13P35453 USP8P1-201ENST00000494673 3183 ntBASIC4.12□□□□□ -1.75
HOXD13P35453 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD13P35453 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms