Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPL21P112-201ENST00000434403 463 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.95□□□□□ -1.62
ATF4P18848 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.95□□□□□ -1.62
ATF4P18848 RPL12P49-201ENST00000441100 121 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 HMGN2P21-201ENST00000447764 270 ntBASIC4.95□□□□□ -1.62
ATF4P18848 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.95□□□□□ -1.62
ATF4P18848 RPL23AP31-201ENST00000456160 467 ntBASIC4.95□□□□□ -1.62
ATF4P18848 snoU13.4-201ENST00000458916 104 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC073594.1-201ENST00000462065 364 ntBASIC4.95□□□□□ -1.62
ATF4P18848 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.95□□□□□ -1.62
ATF4P18848 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.95□□□□□ -1.62
ATF4P18848 Y_RNA.689-201ENST00000516589 107 ntBASIC4.95□□□□□ -1.62
ATF4P18848 RNU7-30P-201ENST00000516835 62 ntBASIC4.95□□□□□ -1.62
ATF4P18848 NARSP2-201ENST00000518524 679 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.95□□□□□ -1.62
ATF4P18848 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.95□□□□□ -1.62
ATF4P18848 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.95□□□□□ -1.62
ATF4P18848 AC107953.1-201ENST00000522216 297 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 SNRPGP16-201ENST00000533275 226 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.95□□□□□ -1.62
ATF4P18848 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.95□□□□□ -1.62
ATF4P18848 AC007068.2-201ENST00000543168 395 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.95□□□□□ -1.62
ATF4P18848 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.95□□□□□ -1.62
ATF4P18848 RPS3AP23-202ENST00000574601 686 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.95□□□□□ -1.62
ATF4P18848 AC067852.3-201ENST00000589177 561 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC005332.4-201ENST00000592752 579 ntBASIC4.95□□□□□ -1.62
ATF4P18848 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.95□□□□□ -1.62
ATF4P18848 AC009233.1-201ENST00000616477 371 ntBASIC4.95□□□□□ -1.62
ATF4P18848 MIR6133-201ENST00000617057 108 ntBASIC4.95□□□□□ -1.62
ATF4P18848 MIR6849-201ENST00000618543 69 ntBASIC4.95□□□□□ -1.62
ATF4P18848 MIR6503-201ENST00000622884 86 ntBASIC4.95□□□□□ -1.62
ATF4P18848 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
ATF4P18848 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.95□□□□□ -1.62
ATF4P18848 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ATF4P18848 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.95□□□□□ -1.62
ATF4P18848 AL731532.2-201ENST00000623542 1953 ntBASIC4.95□□□□□ -1.62
ATF4P18848 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.94□□□□□ -1.62
ATF4P18848 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 AL442639.1-201ENST00000625030 1899 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AP001350.1-201ENST00000601906 1524 ntBASIC4.94□□□□□ -1.62
ATF4P18848 ADAM5-202ENST00000399789 1942 ntBASIC4.94□□□□□ -1.62
ATF4P18848 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 Y_RNA.529-201ENST00000384586 119 ntBASIC4.94□□□□□ -1.62
ATF4P18848 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 AC005522.1-201ENST00000395416 346 ntBASIC4.94□□□□□ -1.62
ATF4P18848 RPL32P23-201ENST00000397237 405 ntBASIC4.94□□□□□ -1.62
ATF4P18848 RPS4XP9-201ENST00000405151 780 ntBASIC4.94□□□□□ -1.62
ATF4P18848 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.94□□□□□ -1.62
ATF4P18848 RN7SKP86-201ENST00000410454 332 ntBASIC4.94□□□□□ -1.62
ATF4P18848 RN7SKP140-201ENST00000411196 284 ntBASIC4.94□□□□□ -1.62
ATF4P18848 PDCL2P1-201ENST00000419302 352 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.94□□□□□ -1.62
ATF4P18848 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 AC099670.1-201ENST00000455141 783 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC116533.1-201ENST00000459748 321 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC098818.1-201ENST00000478593 252 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC092451.1-201ENST00000480211 153 ntBASIC4.94□□□□□ -1.62
ATF4P18848 RN7SL568P-201ENST00000493069 298 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.94□□□□□ -1.62
ATF4P18848 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.94□□□□□ -1.62
ATF4P18848 MRPS33P2-201ENST00000507850 322 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.94□□□□□ -1.62
ATF4P18848 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.94□□□□□ -1.62
ATF4P18848 RN7SKP196-201ENST00000516267 345 ntBASIC4.94□□□□□ -1.62
ATF4P18848 Y_RNA.675-201ENST00000516389 149 ntBASIC4.94□□□□□ -1.62
ATF4P18848 Vault.1-201ENST00000516474 102 ntBASIC4.94□□□□□ -1.62
ATF4P18848 IGKV1D-22-201ENST00000518953 324 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.94□□□□□ -1.62
ATF4P18848 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.94□□□□□ -1.62
ATF4P18848 AL121576.1-201ENST00000556055 276 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.94□□□□□ -1.62
ATF4P18848 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.94□□□□□ -1.62
ATF4P18848 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.94□□□□□ -1.62
ATF4P18848 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.94□□□□□ -1.62
ATF4P18848 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.94□□□□□ -1.62
ATF4P18848 AC007619.2-201ENST00000605743 379 ntBASIC4.94□□□□□ -1.62
ATF4P18848 AC068213.1-201ENST00000625124 226 ntBASIC4.94□□□□□ -1.62
ATF4P18848 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
ATF4P18848 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.94□□□□□ -1.62
ATF4P18848 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.94□□□□□ -1.62
ATF4P18848 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATF4P18848 AC008079.2-201ENST00000623543 20396 ntBASIC4.94□□□□□ -1.62
ATF4P18848 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
ATF4P18848 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATF4P18848 AL138820.1-201ENST00000617901 5305 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms