Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RPS4XP6-201ENST00000477670 797 ntBASIC3.42□□□□□ -1.86
SNX4O95219 ACTG1P13-201ENST00000486987 1043 ntBASIC3.42□□□□□ -1.86
SNX4O95219 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX4O95219 RPL21P129-201ENST00000491732 478 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AP002812.1-201ENST00000495378 474 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AP005205.1-201ENST00000563503 508 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.42□□□□□ -1.86
SNX4O95219 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX4O95219 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX4O95219 AC015967.1-201ENST00000619893 476 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AC009318.4-201ENST00000620496 486 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AC040168.1-201ENST00000623594 991 ntBASIC3.42□□□□□ -1.86
SNX4O95219 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SNX4O95219 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SNX4O95219 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX4O95219 AC092435.3-201ENST00000565538 3654 ntBASIC3.42□□□□□ -1.86
SNX4O95219 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX4O95219 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX4O95219 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX4O95219 RNU6-115P-201ENST00000364310 107 ntBASIC3.41□□□□□ -1.86
SNX4O95219 SNORD82-201ENST00000365530 70 ntBASIC3.41□□□□□ -1.86
SNX4O95219 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
SNX4O95219 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
SNX4O95219 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SNX4O95219 HSFY3P-201ENST00000444242 1191 ntBASIC3.41□□□□□ -1.86
SNX4O95219 GTF2IP12-201ENST00000456547 356 ntBASIC3.41□□□□□ -1.86
SNX4O95219 RNA5SP310-201ENST00000459084 116 ntBASIC3.41□□□□□ -1.86
SNX4O95219 SNORA84-201ENST00000459229 133 ntBASIC3.41□□□□□ -1.86
SNX4O95219 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
SNX4O95219 AC108078.3-201ENST00000502633 489 ntBASIC3.41□□□□□ -1.86
SNX4O95219 TXNP6-201ENST00000510190 310 ntBASIC3.41□□□□□ -1.86
SNX4O95219 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX4O95219 SETP12-201ENST00000514068 805 ntBASIC3.41□□□□□ -1.86
SNX4O95219 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX4O95219 AC239860.2-201ENST00000525886 270 ntBASIC3.41□□□□□ -1.86
SNX4O95219 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX4O95219 SNORD39.3-201ENST00000584451 71 ntBASIC3.41□□□□□ -1.86
SNX4O95219 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX4O95219 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX4O95219 RNU1-30P-201ENST00000606575 163 ntBASIC3.41□□□□□ -1.86
SNX4O95219 AC106028.5-201ENST00000610332 395 ntBASIC3.41□□□□□ -1.86
SNX4O95219 AL121772.2-201ENST00000614331 297 ntBASIC3.41□□□□□ -1.86
SNX4O95219 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX4O95219 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX4O95219 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
SNX4O95219 MFSD8-236ENST00000641509 4050 ntBASIC3.41□□□□□ -1.86
SNX4O95219 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNX4O95219 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SNX4O95219 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNX4O95219 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SNX4O95219 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNX4O95219 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SNX4O95219 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RNU6-619P-201ENST00000365146 108 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
SNX4O95219 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SNX4O95219 SNORA48.7-201ENST00000391302 135 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RPL21P17-201ENST00000397467 475 ntBASIC3.4□□□□□ -1.87
SNX4O95219 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RNA5SP38-201ENST00000410750 119 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RAB9AP3-201ENST00000412737 573 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AL353705.1-201ENST00000433468 480 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.4□□□□□ -1.87
SNX4O95219 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX4O95219 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.4□□□□□ -1.87
SNX4O95219 RAB9AP1-201ENST00000449393 573 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX4O95219 UBDP1-202ENST00000457888 382 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC091564.1-201ENST00000464563 479 ntBASIC3.4□□□□□ -1.87
SNX4O95219 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX4O95219 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX4O95219 RNU1-95P-201ENST00000516357 160 ntBASIC3.4□□□□□ -1.87
SNX4O95219 SNORA67.7-201ENST00000516664 135 ntBASIC3.4□□□□□ -1.87
SNX4O95219 RNU1-128P-201ENST00000516704 160 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX4O95219 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
SNX4O95219 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.4□□□□□ -1.87
SNX4O95219 AP000916.1-201ENST00000533869 835 ntBASIC3.4□□□□□ -1.87
SNX4O95219 EEF1B2P4-201ENST00000551398 348 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC011611.5-201ENST00000552477 578 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.4□□□□□ -1.87
SNX4O95219 DNAJC8P1-201ENST00000554535 372 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC090666.1-201ENST00000578241 445 ntBASIC3.4□□□□□ -1.87
SNX4O95219 FAM60BP-201ENST00000578364 658 ntBASIC3.4□□□□□ -1.87
SNX4O95219 MIR3158-1-201ENST00000583596 81 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX4O95219 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX4O95219 ZNF92P2-201ENST00000600543 1059 ntBASIC3.4□□□□□ -1.87
SNX4O95219 GAS5-AS1-201ENST00000602767 694 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AP002907.1-201ENST00000606361 1430 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC004832.5-201ENST00000608677 401 ntBASIC3.4□□□□□ -1.87
SNX4O95219 VN1R9P-201ENST00000614184 867 ntBASIC3.4□□□□□ -1.87
SNX4O95219 AC018816.2-201ENST00000621460 353 ntBASIC3.4□□□□□ -1.87
SNX4O95219 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNX4O95219 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SNX4O95219 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.4□□□□□ -1.87
SNX4O95219 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms