Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC083899.3-201ENST00000603413 594 ntBASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC007620.3-201ENST00000608131 497 ntBASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 AC231759.1-201ENST00000616455 597 ntBASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
KIAA1549Q9HCM3 MIR26A1-201ENST00000362205 77 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-304P-201ENST00000364855 107 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AL138827.1-201ENST00000402666 306 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 ST13P20-201ENST00000447996 1065 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 RPL31P13-201ENST00000484151 370 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC078817.1-201ENST00000492623 435 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC107016.2-201ENST00000547968 190 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC138761.3-201ENST00000579993 334 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC105429.2-201ENST00000610567 517 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AL359535.1-201ENST00000612100 1087 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AL020991.1-201ENST00000612314 373 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 LRRC77P-213ENST00000637727 880 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AP001486.2-201ENST00000561652 5113 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC092593.1-201ENST00000515413 1815 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 SYT14P1-202ENST00000600441 1448 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 RNA5SP189-201ENST00000364920 115 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AL355379.1-201ENST00000405542 640 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 ELOCP6-201ENST00000429066 328 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 FTH1P1-201ENST00000437933 532 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 ELOCP12-201ENST00000458706 328 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC118465.1-201ENST00000513820 1271 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 RNU6-347P-201ENST00000516658 105 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC103783.1-201ENST00000520506 373 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 PTP4A1P6-201ENST00000531034 478 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC007954.1-201ENST00000554198 494 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC083760.1-201ENST00000589621 670 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC103881.1-201ENST00000603476 538 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 RPL23AP92-201ENST00000603609 255 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 CR381653.2-201ENST00000624041 768 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 AC009039.2-201ENST00000624524 529 ntBASIC2.47□□□□□ -2.01
KIAA1549Q9HCM3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
KIAA1549Q9HCM3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC008264.2-201ENST00000610193 3731 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 XPOTP1-201ENST00000443317 2398 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 NACA3P-201ENST00000359690 648 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 RNU2-6P-201ENST00000411404 190 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AL096701.2-201ENST00000416920 238 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 MTCYBP31-201ENST00000438855 1122 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AL662791.1-201ENST00000441992 928 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 RPL29P29-201ENST00000448725 423 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AP000873.1-201ENST00000463987 400 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC004924.1-201ENST00000480160 781 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AL355836.1-201ENST00000555951 870 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 RNA5SP108-201ENST00000605921 117 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC018754.1-201ENST00000607486 925 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 AC090115.4-201ENST00000609970 188 ntBASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.46□□□□□ -2.02
KIAA1549Q9HCM3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 GABPAP-201ENST00000419271 1356 ntBASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 AC109315.1-201ENST00000584143 1347 ntBASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 RNA5SP289-201ENST00000362332 137 ntBASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 RNU4-82P-201ENST00000362443 140 ntBASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 BMS1P22-201ENST00000414726 313 ntBASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 AC048351.1-201ENST00000420064 602 ntBASIC2.45□□□□□ -2.02
KIAA1549Q9HCM3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms