Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RPL34P26-201ENST00000445636 354 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 AC015908.1-201ENST00000478739 476 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 AC025518.1-201ENST00000479856 347 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 AC017007.3-201ENST00000479865 435 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 NAMPTP2-201ENST00000505629 1115 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 AC104619.4-201ENST00000510773 249 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 RNA5SP315-201ENST00000516340 116 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 RNA5SP312-201ENST00000517068 116 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 AL391156.1-201ENST00000554965 554 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VCX3BQ9H321 AL451086.1-201ENST00000605596 223 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 AP000346.3-201ENST00000622821 210 ntBASIC2.81□□□□□ -1.96
VCX3BQ9H321 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
VCX3BQ9H321 CUL1P1-201ENST00000509510 2425 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC012618.3-205ENST00000637896 1496 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 SPRR2C-201ENST00000290702 219 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 RNU4-35P-201ENST00000362588 141 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 SNORD15B-201ENST00000384714 146 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 MIR181A2-201ENST00000384863 110 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 RNA5SP252-201ENST00000391131 119 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VCX3BQ9H321 FAT1P1-201ENST00000406588 507 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AL035423.1-201ENST00000420331 213 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC007394.1-201ENST00000421941 531 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC073143.1-201ENST00000436316 395 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 MTCO3P17-201ENST00000443775 513 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC073901.1-201ENST00000462471 408 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 CDC42P4-201ENST00000510507 563 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC022616.2-201ENST00000523185 300 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 FAM60DP-201ENST00000524174 632 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 AGGF1P6-201ENST00000569213 976 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 CCDC58P3-201ENST00000590792 430 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3BQ9H321 AL138880.2-201ENST00000616214 239 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 AC099506.2-201ENST00000623074 221 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 ZNF271P-202ENST00000465539 1970 ntBASIC2.8□□□□□ -1.96
VCX3BQ9H321 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCX3BQ9H321 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AL122126.1-201ENST00000546905 1318 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 METTL5-202ENST00000308099 629 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC096533.1-201ENST00000411645 353 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC122718.1-201ENST00000439448 744 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AL513321.1-201ENST00000441175 761 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC114755.5-201ENST00000447760 831 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 PRDX3P3-201ENST00000447765 522 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 ST13P20-201ENST00000447996 1065 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 RBMY2UP-201ENST00000453474 324 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AL109741.2-201ENST00000455561 343 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 RPL35AP28-201ENST00000459730 331 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC091153.1-201ENST00000466297 402 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 NDUFA5P12-201ENST00000503796 343 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 OR4R1P-201ENST00000529879 463 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC060766.3-201ENST00000591442 263 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC245389.1-201ENST00000605141 529 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC211433.2-201ENST00000608433 387 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 AC009039.2-201ENST00000624524 529 ntBASIC2.79□□□□□ -1.96
VCX3BQ9H321 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.79□□□□□ -1.96
VCX3BQ9H321 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCX3BQ9H321 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VCX3BQ9H321 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3BQ9H321 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3BQ9H321 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.78□□□□□ -1.96
VCX3BQ9H321 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VCX3BQ9H321 AL121657.1-201ENST00000327215 531 ntBASIC2.78□□□□□ -1.96
VCX3BQ9H321 SNORD3H-201ENST00000384486 214 ntBASIC2.78□□□□□ -1.96
VCX3BQ9H321 MIR512-1-201ENST00000384913 84 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms