Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL050321.1-201ENST00000432363 400 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AL450263.2-201ENST00000439400 589 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 RPS17P13-201ENST00000448974 407 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 MTND1P16-201ENST00000465177 898 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC108064.1-201ENST00000513791 460 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 RNU6-1225P-201ENST00000516336 65 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC118273.2-201ENST00000532092 465 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC068714.1-201ENST00000559623 800 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC233280.2-201ENST00000603917 1070 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AL451044.1-201ENST00000604867 238 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 AC233309.1-201ENST00000619522 751 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 RLIMP1-201ENST00000339626 1680 ntBASIC4.88□□□□□ -1.63
SALL3Q9BXA9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SALL3Q9BXA9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 GTF2H2B-203ENST00000508065 1432 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 EIF4A1P3-201ENST00000411521 244 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 PIGPP2-201ENST00000411569 458 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC048351.1-201ENST00000420064 602 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 IPMKP1-201ENST00000425988 855 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 ZNF863P-201ENST00000426746 417 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 NANOGP6-201ENST00000429190 847 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 SEPT7P5-201ENST00000434048 306 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 RPL21P129-201ENST00000491732 478 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 PRDX4P1-201ENST00000507189 574 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AP002812.4-201ENST00000532139 286 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC084757.1-201ENST00000559987 490 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC123786.2-201ENST00000603459 275 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 RNA5SP196-201ENST00000625967 102 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SALL3Q9BXA9 AC006971.1-201ENST00000407916 4486 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.87□□□□□ -1.63
SALL3Q9BXA9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 AC092079.1-201ENST00000558620 1985 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 AC109315.1-201ENST00000584143 1347 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 FGF7P2-201ENST00000332473 296 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 RNU6-694P-201ENST00000364071 147 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 RN7SKP224-201ENST00000364140 325 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 MIR320B1-201ENST00000390209 79 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 JKAMPP1-201ENST00000413804 919 ntBASIC4.86□□□□□ -1.63
SALL3Q9BXA9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.86□□□□□ -1.63
SALL3Q9BXA9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms