Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 BNIP3P8-201ENST00000597863 560 ntBASIC4.21□□□□□ -1.74
IFT140Q96RY7 U7.8-201ENST00000619968 63 ntBASIC4.21□□□□□ -1.74
IFT140Q96RY7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
IFT140Q96RY7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
IFT140Q96RY7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
IFT140Q96RY7 AC093311.1-201ENST00000506586 2021 ntBASIC4.2□□□□□ -1.74
IFT140Q96RY7 RNU6-253P-201ENST00000384730 105 ntBASIC4.2□□□□□ -1.74
IFT140Q96RY7 AL024474.1-201ENST00000404655 591 ntBASIC4.2□□□□□ -1.74
IFT140Q96RY7 RPL23AP22-201ENST00000437556 453 ntBASIC4.2□□□□□ -1.74
IFT140Q96RY7 RN7SKP219-201ENST00000516825 296 ntBASIC4.2□□□□□ -1.74
IFT140Q96RY7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.2□□□□□ -1.74
IFT140Q96RY7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.2□□□□□ -1.74
IFT140Q96RY7 AC010620.2-201ENST00000600135 313 ntBASIC4.2□□□□□ -1.74
IFT140Q96RY7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
IFT140Q96RY7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IFT140Q96RY7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 CACYBPP2-201ENST00000453625 678 ntBASIC4.19□□□□□ -1.74
IFT140Q96RY7 HMGB1P15-201ENST00000453854 435 ntBASIC4.19□□□□□ -1.74
IFT140Q96RY7 RPL9P6-201ENST00000492764 598 ntBASIC4.19□□□□□ -1.74
IFT140Q96RY7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IFT140Q96RY7 RFPL1S-203ENST00000539579 330 ntBASIC4.19□□□□□ -1.74
IFT140Q96RY7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
IFT140Q96RY7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 AL136981.2-201ENST00000617319 734 ntBASIC4.19□□□□□ -1.74
IFT140Q96RY7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.19□□□□□ -1.74
IFT140Q96RY7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IFT140Q96RY7 AC002543.1-201ENST00000299783 1954 ntBASIC4.19□□□□□ -1.74
IFT140Q96RY7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 RNU6-984P-201ENST00000363236 109 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AL162388.1-201ENST00000450912 352 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 RN7SKP31-201ENST00000516354 278 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC100870.1-201ENST00000522035 505 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC018630.1-201ENST00000541376 925 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC005046.1-201ENST00000608515 625 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC009487.2-201ENST00000420969 6821 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC080128.1-201ENST00000474389 1917 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 MTND5P6-201ENST00000422338 1798 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT140Q96RY7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT140Q96RY7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT140Q96RY7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC080125.1-201ENST00000414888 684 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 Z99127.2-201ENST00000441426 334 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 RPL7P52-201ENST00000449200 742 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC068587.2-201ENST00000478386 781 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 RPL36AP51-201ENST00000487216 318 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 SNORA9.3-201ENST00000516383 129 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 AC022960.2-201ENST00000616300 666 ntBASIC4.18□□□□□ -1.74
IFT140Q96RY7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.18□□□□□ -1.74
IFT140Q96RY7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT140Q96RY7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 OR11H5P-202ENST00000641612 1325 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT140Q96RY7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT140Q96RY7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
IFT140Q96RY7 AC069218.2-201ENST00000411665 344 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 RPL31P12-201ENST00000422587 358 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 RPS6P12-201ENST00000432491 726 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 AC011816.1-201ENST00000441346 546 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 ST13P20-201ENST00000447996 1065 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.17□□□□□ -1.74
IFT140Q96RY7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
IFT140Q96RY7 AC107918.3-201ENST00000533272 382 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 AC128657.1-201ENST00000549459 145 ntBASIC4.17□□□□□ -1.74
IFT140Q96RY7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.17□□□□□ -1.74
IFT140Q96RY7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.17□□□□□ -1.74
IFT140Q96RY7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
IFT140Q96RY7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
IFT140Q96RY7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 MIR181A2-201ENST00000384863 110 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 AL451074.5-201ENST00000415894 435 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 RPS29P6-201ENST00000438196 145 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 AL592437.1-201ENST00000443781 492 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 EIF2S2P4-201ENST00000461070 984 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 AC074029.1-201ENST00000552531 1044 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 VN1R9P-201ENST00000614184 867 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 Z99129.2-201ENST00000619967 314 ntBASIC4.16□□□□□ -1.74
IFT140Q96RY7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.16□□□□□ -1.74
IFT140Q96RY7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.15□□□□□ -1.74
IFT140Q96RY7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.15□□□□□ -1.74
IFT140Q96RY7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
IFT140Q96RY7 AC138915.3-201ENST00000562908 1389 ntBASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms