Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC133134.1-201ENST00000466800 359 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 RPL23AP45-201ENST00000476406 468 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.13□□□□□ -1.75
TOPBP1Q92547 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.13□□□□□ -1.75
TOPBP1Q92547 RPL23AP84-201ENST00000571193 464 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 AL136981.2-201ENST00000617319 734 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 AC026523.2-201ENST00000625039 7739 ntBASIC4.13□□□□□ -1.75
TOPBP1Q92547 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOPBP1Q92547 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.13□□□□□ -1.75
TOPBP1Q92547 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOPBP1Q92547 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
TOPBP1Q92547 Z73965.1-201ENST00000623412 2297 ntBASIC4.12□□□□□ -1.75
TOPBP1Q92547 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOPBP1Q92547 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 RAC1P3-201ENST00000416129 580 ntBASIC4.12□□□□□ -1.75
TOPBP1Q92547 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 USP9YP20-201ENST00000419224 558 ntBASIC4.12□□□□□ -1.75
TOPBP1Q92547 BTG3P1-201ENST00000435859 716 ntBASIC4.12□□□□□ -1.75
TOPBP1Q92547 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 AC068587.2-201ENST00000478386 781 ntBASIC4.12□□□□□ -1.75
TOPBP1Q92547 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.12□□□□□ -1.75
TOPBP1Q92547 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOPBP1Q92547 NR1H5P-201ENST00000452683 1377 ntBASIC4.12□□□□□ -1.75
TOPBP1Q92547 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 AL512633.1-201ENST00000399931 655 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 NPM1P35-201ENST00000533043 868 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 AC018630.1-201ENST00000541376 925 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOPBP1Q92547 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 MIR1291-201ENST00000627649 87 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOPBP1Q92547 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOPBP1Q92547 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOPBP1Q92547 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 VN1R48P-201ENST00000448149 1036 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 AL354710.1-201ENST00000453641 246 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 AC091544.1-201ENST00000484702 348 ntBASIC4.11□□□□□ -1.75
TOPBP1Q92547 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.11□□□□□ -1.75
TOPBP1Q92547 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOPBP1Q92547 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.1□□□□□ -1.75
TOPBP1Q92547 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.1□□□□□ -1.75
TOPBP1Q92547 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
TOPBP1Q92547 AC125238.1-201ENST00000448842 249 ntBASIC4.1□□□□□ -1.75
TOPBP1Q92547 TRBV1-201ENST00000476502 284 ntBASIC4.1□□□□□ -1.75
TOPBP1Q92547 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.1□□□□□ -1.75
TOPBP1Q92547 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOPBP1Q92547 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOPBP1Q92547 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.1□□□□□ -1.75
TOPBP1Q92547 AC009318.2-201ENST00000610917 651 ntBASIC4.1□□□□□ -1.75
TOPBP1Q92547 AC069528.2-201ENST00000624849 1991 ntBASIC4.1□□□□□ -1.75
TOPBP1Q92547 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.1□□□□□ -1.75
TOPBP1Q92547 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOPBP1Q92547 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.09□□□□□ -1.75
TOPBP1Q92547 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
TOPBP1Q92547 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOPBP1Q92547 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOPBP1Q92547 OR52B1P-201ENST00000316506 909 ntBASIC4.09□□□□□ -1.75
TOPBP1Q92547 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TOPBP1Q92547 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.09□□□□□ -1.75
TOPBP1Q92547 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.09□□□□□ -1.75
TOPBP1Q92547 AC044913.1-201ENST00000557200 430 ntBASIC4.09□□□□□ -1.75
TOPBP1Q92547 GTF2H2B-203ENST00000508065 1432 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 AC135999.1-201ENST00000478962 479 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TOPBP1Q92547 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 RNU6-1334P-201ENST00000516032 105 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 AC021269.2-201ENST00000532318 330 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.08□□□□□ -1.76
TOPBP1Q92547 AL008729.2-201ENST00000606393 473 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 AC008121.2-201ENST00000614647 523 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 AL162233.1-201ENST00000620014 944 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 AL021368.2-201ENST00000606125 5352 ntBASIC4.08□□□□□ -1.76
TOPBP1Q92547 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TOPBP1Q92547 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOPBP1Q92547 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TOPBP1Q92547 RNA5SP456-201ENST00000364002 114 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 AL034379.1-201ENST00000423216 253 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.07□□□□□ -1.76
TOPBP1Q92547 MRPL50P4-201ENST00000446432 475 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 ST13P20-201ENST00000447996 1065 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 AC002553.2-201ENST00000453217 340 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.07□□□□□ -1.76
TOPBP1Q92547 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.07□□□□□ -1.76
TOPBP1Q92547 AC026464.5-201ENST00000562497 722 ntBASIC4.07□□□□□ -1.76
TOPBP1Q92547 AC025946.2-201ENST00000603398 234 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms