Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 AC004925.1-201ENST00000624256 2706 ntBASIC4.06□□□□□ -1.76
PRPF39Q86UA1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF39Q86UA1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RNA5SP399-201ENST00000364003 117 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 Y_RNA.465-201ENST00000384293 102 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RNA5SP80-201ENST00000410475 111 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RAD23BP2-201ENST00000416003 1207 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AL513175.2-201ENST00000422071 443 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RRM2P4-201ENST00000441721 562 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RPS15AP17-201ENST00000470598 390 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RPL7P24-201ENST00000493052 752 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC134050.1-201ENST00000495088 933 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC114322.1-201ENST00000506771 926 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC026726.1-201ENST00000512859 601 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RNU6-27P-201ENST00000516146 107 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 SNORA31.20-201ENST00000517111 133 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 HSPE1P5-201ENST00000561489 272 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 MIR3158-1-201ENST00000583596 81 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 MAGOH2P-202ENST00000584384 429 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 MRPS35P3-201ENST00000603189 709 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 BNIP3P11-201ENST00000603878 563 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AL592436.1-201ENST00000605135 558 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC106052.1-201ENST00000608029 497 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC006133.1-201ENST00000617106 264 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC006963.1-201ENST00000624003 1052 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC048347.1-201ENST00000624621 427 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 USP8P1-201ENST00000494673 3183 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF39Q86UA1 AC095050.2-201ENST00000510748 1458 ntBASIC4.05□□□□□ -1.76
PRPF39Q86UA1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 U3.29-201ENST00000391296 212 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 PTMAP2-201ENST00000397627 327 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 ERHP2-201ENST00000402323 299 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AL450338.1-201ENST00000407987 512 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 RNU2-37P-201ENST00000410695 177 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC096638.2-201ENST00000434965 711 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC026410.2-201ENST00000460281 156 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 MTND1P16-201ENST00000465177 898 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 SNORA67.7-201ENST00000516664 135 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 EEF1B2P4-201ENST00000551398 348 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC126177.3-201ENST00000551839 688 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 MIR4429-201ENST00000580105 73 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 MIR4637-201ENST00000582405 84 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 SNORD84-203ENST00000584275 78 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 XIAPP1-201ENST00000603162 600 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC055876.5-201ENST00000605667 259 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AL590282.1-201ENST00000610379 1136 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms