Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AL109766.1-201ENST00000555080 552 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 MIR4795-201ENST00000584182 89 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AL353997.4-201ENST00000586196 166 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC005498.1-201ENST00000592125 465 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 VN1R80P-201ENST00000597126 338 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AL020997.2-201ENST00000602607 184 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AC121334.2-201ENST00000605387 271 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AL022401.1-201ENST00000619498 108 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 ADAM5-202ENST00000399789 1942 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 LINC00622-201ENST00000562811 1570 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 AL442128.2-201ENST00000620246 1824 ntBASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USPL1Q5W0Q7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 RNA5SP447-201ENST00000363749 119 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 RNU6-744P-201ENST00000365557 107 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 RNU6-1316P-201ENST00000384242 108 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 EIF5P1-201ENST00000400019 1231 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 BTF3L4P3-201ENST00000418879 476 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 COX6CP13-201ENST00000428703 226 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 PPIAP21-201ENST00000464473 501 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AP000893.1-201ENST00000474462 794 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 SNRPCP3-201ENST00000474888 476 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 RN7SL441P-201ENST00000492388 296 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AL049874.2-201ENST00000492636 288 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC068714.1-201ENST00000559623 800 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC022726.1-201ENST00000587475 207 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC055876.5-201ENST00000605667 259 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 DISC2.1-201ENST00000612827 205 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC074140.1-201ENST00000621617 208 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 AC068724.3-201ENST00000625906 87 ntBASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USPL1Q5W0Q7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 SNORA51.2-201ENST00000364595 132 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 MIR1193-201ENST00000408109 78 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AL359704.1-201ENST00000411586 781 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 RPL17P36-201ENST00000420302 549 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AF228730.4-201ENST00000421457 183 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC096632.1-201ENST00000427395 310 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AL691482.1-201ENST00000453255 87 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AP1S2P1-201ENST00000457344 379 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC090602.1-201ENST00000469695 252 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 RNU6-835P-201ENST00000516974 104 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 RMST_3.1-201ENST00000611651 109 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC009237.17-201ENST00000618111 748 ntBASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USPL1Q5W0Q7 AC092447.10-201ENST00000620607 1652 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms