Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 SLC31A1P1-201ENST00000451221 567 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 MTCO3P16-201ENST00000454456 754 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC006390.1-201ENST00000508068 283 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 KCTD9P2-201ENST00000512203 1013 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC108064.1-201ENST00000513791 460 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 RNA5SP49-201ENST00000516450 115 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC105233.3-201ENST00000531125 744 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 MTND4P33-201ENST00000556706 766 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC090695.1-201ENST00000561269 1222 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC006116.5-201ENST00000591936 559 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC091057.2-201ENST00000602594 792 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 DUXAP3-201ENST00000603616 594 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AC010738.1-201ENST00000604970 987 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AL451086.1-201ENST00000605596 223 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 BRDTP1-201ENST00000605735 677 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 FAM27D1-201ENST00000612308 341 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AL360181.4-201ENST00000621752 134 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 PLCE1P1-201ENST00000622094 305 ntBASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
ANKRD55Q3KP44 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AL158163.1-201ENST00000603915 1649 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 Y_RNA.192-201ENST00000363977 102 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 RNA5SP509-201ENST00000364577 119 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 U1.1-201ENST00000384101 164 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 SNORD3H-201ENST00000384486 214 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 Y_RNA.625-201ENST00000411256 107 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC012065.2-201ENST00000421295 375 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 COX6CP17-201ENST00000421389 185 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 RPL21P109-201ENST00000422213 475 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 ATP5F1P1-201ENST00000433775 569 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 HMGN2P20-201ENST00000437531 273 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 MTCO3P20-201ENST00000454926 688 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC011276.1-201ENST00000469688 323 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 RN7SL691P-201ENST00000494487 301 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC021146.1-201ENST00000511202 716 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC010625.1-201ENST00000511296 403 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 RN7SKP265-201ENST00000516448 223 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AL139174.1-201ENST00000531489 886 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AP000619.3-201ENST00000535634 1127 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 TRAV8-5-201ENST00000537369 341 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC018630.1-201ENST00000541376 925 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC022662.1-201ENST00000580252 331 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC068790.4-201ENST00000602474 263 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC008745.1-201ENST00000604064 271 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AL136164.4-201ENST00000625013 2135 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC008993.2-201ENST00000631744 806 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 AC116667.1-201ENST00000604855 2072 ntBASIC3.3□□□□□ -1.88
ANKRD55Q3KP44 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms