Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC097713.2-201ENST00000430199 356 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC005002.1-201ENST00000447458 540 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC008379.1-201ENST00000463655 464 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC104108.1-201ENST00000509930 412 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC095057.3-201ENST00000567102 1157 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AP005229.2-201ENST00000609980 697 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC018926.3-201ENST00000618841 406 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC106730.3-201ENST00000624568 641 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC017104.5-201ENST00000637647 639 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC011978.2-201ENST00000569835 2054 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC021755.1-201ENST00000559747 1447 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS1Q01581 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS1Q01581 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AF117829.1-206ENST00000621883 3802 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS1Q01581 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL512646.1-201ENST00000269395 1077 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RNU6-600P-201ENST00000362524 99 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RNU6-354P-201ENST00000383862 107 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RNU6-610P-201ENST00000384264 107 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 MIR591-201ENST00000385290 95 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS1Q01581 SNORA11C-201ENST00000408532 129 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC005019.1-201ENST00000436455 431 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC092170.1-201ENST00000440211 356 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL662791.1-201ENST00000441992 928 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC004865.1-201ENST00000442276 1003 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 Z77249.1-201ENST00000444622 1175 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 MTND1P33-201ENST00000446251 917 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC092754.2-201ENST00000463506 460 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RPL21P10-201ENST00000463521 490 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC126121.1-201ENST00000482313 553 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 WBP1LP4-201ENST00000505043 344 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 RN7SKP244-201ENST00000516513 307 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 MTND2P7-201ENST00000521337 640 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC092451.2-201ENST00000538746 658 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 CR383656.14-201ENST00000551951 406 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 NCAPGP2-201ENST00000557911 754 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 MIR3690-201ENST00000580266 75 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RN7SL339P-201ENST00000580597 296 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC090312.2-201ENST00000582687 378 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 SNRPGP15-201ENST00000600149 222 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 ELOCP35-201ENST00000604289 336 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 BNIP3P19-201ENST00000605397 577 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC021851.1-201ENST00000608537 1082 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AL157817.1-201ENST00000614264 790 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC084757.4-201ENST00000616350 526 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC244100.1-202ENST00000621554 382 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS1Q01581 ZNF826P-207ENST00000622273 1910 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC107081.3-201ENST00000612715 2034 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 MTND5P24-201ENST00000438892 1767 ntBASIC3.1□□□□□ -1.91
HMGCS1Q01581 AC118273.1-201ENST00000525324 3006 ntBASIC3.09□□□□□ -1.91
HMGCS1Q01581 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGCS1Q01581 RNA5SP295-201ENST00000362655 121 ntBASIC3.09□□□□□ -1.91
HMGCS1Q01581 SNORA63.3-201ENST00000362682 132 ntBASIC3.09□□□□□ -1.91
HMGCS1Q01581 U3.11-201ENST00000364476 212 ntBASIC3.09□□□□□ -1.91
HMGCS1Q01581 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGCS1Q01581 AP002784.2-201ENST00000397300 549 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms