Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU2-21P-201ENST00000410368 188 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM3P62310 AC005300.1-201ENST00000428401 373 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC004975.1-201ENST00000428733 208 ntBASIC2.33□□□□□ -2.04
LSM3P62310 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.33□□□□□ -2.04
LSM3P62310 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM3P62310 AC140076.1-201ENST00000449897 361 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AL109741.2-201ENST00000455561 343 ntBASIC2.33□□□□□ -2.04
LSM3P62310 RPL23AP31-201ENST00000456160 467 ntBASIC2.33□□□□□ -2.04
LSM3P62310 BTF3P5-201ENST00000457252 467 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC114982.2-201ENST00000461396 358 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.33□□□□□ -2.04
LSM3P62310 AP002812.1-201ENST00000495378 474 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.33□□□□□ -2.04
LSM3P62310 PRELID3BP5-201ENST00000508612 460 ntBASIC2.33□□□□□ -2.04
LSM3P62310 HIGD1AP3-201ENST00000515857 278 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM3P62310 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.33□□□□□ -2.04
LSM3P62310 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM3P62310 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM3P62310 YWHAQP7-201ENST00000603536 658 ntBASIC2.33□□□□□ -2.04
LSM3P62310 DUXAP3-201ENST00000603616 594 ntBASIC2.33□□□□□ -2.04
LSM3P62310 AC119501.1-201ENST00000603646 475 ntBASIC2.33□□□□□ -2.04
LSM3P62310 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
LSM3P62310 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.33□□□□□ -2.04
LSM3P62310 CR392039.5-201ENST00000623201 510 ntBASIC2.33□□□□□ -2.04
LSM3P62310 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM3P62310 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
LSM3P62310 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LSM3P62310 SNORA51.2-201ENST00000364595 132 ntBASIC2.32□□□□□ -2.04
LSM3P62310 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
LSM3P62310 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.32□□□□□ -2.04
LSM3P62310 AL590290.1-201ENST00000405336 380 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AL162578.1-201ENST00000406202 378 ntBASIC2.32□□□□□ -2.04
LSM3P62310 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 EI24P1-201ENST00000416584 867 ntBASIC2.32□□□□□ -2.04
LSM3P62310 USP9YP20-201ENST00000419224 558 ntBASIC2.32□□□□□ -2.04
LSM3P62310 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 AC023347.2-201ENST00000433994 462 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 NF1P3-201ENST00000457709 450 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.32□□□□□ -2.04
LSM3P62310 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 AC113398.2-201ENST00000507630 558 ntBASIC2.32□□□□□ -2.04
LSM3P62310 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LSM3P62310 RNU6-1073P-201ENST00000517182 106 ntBASIC2.32□□□□□ -2.04
LSM3P62310 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.32□□□□□ -2.04
LSM3P62310 IGKV2D-10-201ENST00000520194 281 ntBASIC2.32□□□□□ -2.04
LSM3P62310 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.32□□□□□ -2.04
LSM3P62310 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.32□□□□□ -2.04
LSM3P62310 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LSM3P62310 HSPE1P20-201ENST00000538133 289 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.32□□□□□ -2.04
LSM3P62310 AC084824.1-201ENST00000550917 1005 ntBASIC2.32□□□□□ -2.04
LSM3P62310 PRELID2P1-201ENST00000552837 301 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.32□□□□□ -2.04
LSM3P62310 AC245389.2-201ENST00000616023 576 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AC243756.2-201ENST00000618406 463 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AC242843.1-201ENST00000618702 573 ntBASIC2.32□□□□□ -2.04
LSM3P62310 AC007342.8-201ENST00000623278 678 ntBASIC2.32□□□□□ -2.04
LSM3P62310 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LSM3P62310 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LSM3P62310 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LSM3P62310 MAPK10-322ENST00000641485 4530 ntBASIC2.32□□□□□ -2.04
LSM3P62310 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
LSM3P62310 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
LSM3P62310 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LSM3P62310 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 RNU6-335P-201ENST00000364563 113 ntBASIC2.31□□□□□ -2.04
LSM3P62310 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 SNORA56-201ENST00000383966 129 ntBASIC2.31□□□□□ -2.04
LSM3P62310 SNORD65-201ENST00000391079 73 ntBASIC2.31□□□□□ -2.04
LSM3P62310 DNAJC19P6-201ENST00000401853 280 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL807761.1-201ENST00000417622 171 ntBASIC2.31□□□□□ -2.04
LSM3P62310 RPS15AP40-201ENST00000419621 391 ntBASIC2.31□□□□□ -2.04
LSM3P62310 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LSM3P62310 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.31□□□□□ -2.04
LSM3P62310 OR51AB1P-201ENST00000429046 620 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.31□□□□□ -2.04
LSM3P62310 AC097713.2-201ENST00000430199 356 ntBASIC2.31□□□□□ -2.04
LSM3P62310 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.31□□□□□ -2.04
LSM3P62310 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 NUTF2P7-201ENST00000453086 375 ntBASIC2.31□□□□□ -2.04
LSM3P62310 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 AC008280.2-201ENST00000455473 307 ntBASIC2.31□□□□□ -2.04
LSM3P62310 AC126182.1-201ENST00000478134 357 ntBASIC2.31□□□□□ -2.04
LSM3P62310 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
LSM3P62310 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms