Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CKS1BP61024 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CKS1BP61024 AC090740.1-201ENST00000623193 2262 ntBASIC2.22□□□□□ -2.05
CKS1BP61024 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CKS1BP61024 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CKS1BP61024 CR383658.2-201ENST00000547576 1525 ntBASIC2.22□□□□□ -2.05
CKS1BP61024 AC011460.1-201ENST00000636268 1834 ntBASIC2.21□□□□□ -2.05
CKS1BP61024 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CKS1BP61024 AL122126.1-201ENST00000546905 1318 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CKS1BP61024 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CKS1BP61024 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CKS1BP61024 SNORA67.1-201ENST00000364749 141 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 SNORD3H-201ENST00000384486 214 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 MIR181B1-201ENST00000385240 110 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC007066.1-201ENST00000392902 381 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 MIR937-201ENST00000401271 86 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKS1BP61024 DBIP2-201ENST00000419076 262 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 BX842559.1-201ENST00000419615 532 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS1BP61024 ETF1P3-201ENST00000430422 1160 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS1BP61024 DDX6P1-205ENST00000441966 1436 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC073387.1-201ENST00000453261 709 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 SETP11-201ENST00000473027 690 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AC090525.1-201ENST00000479116 478 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AP004217.1-201ENST00000480579 346 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 NAMPTP2-201ENST00000505629 1115 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 NPM1P41-201ENST00000512920 831 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AC103843.2-201ENST00000530523 682 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS1BP61024 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 NOP56P3-201ENST00000549457 385 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC007224.1-201ENST00000564410 144 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AL161756.2-201ENST00000604597 246 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 AL157817.1-201ENST00000614264 790 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC092650.2-201ENST00000619984 902 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.21□□□□□ -2.06
CKS1BP61024 AC095031.1-201ENST00000623685 672 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKS1BP61024 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CKS1BP61024 Z82209.1-201ENST00000422141 2135 ntBASIC2.21□□□□□ -2.06
CKS1BP61024 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CKS1BP61024 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS1BP61024 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS1BP61024 AL359893.1-201ENST00000447628 1580 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKS1BP61024 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 SNORA1.3-201ENST00000384676 136 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 RPS4XP3-201ENST00000398541 413 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.2□□□□□ -2.06
CKS1BP61024 AL353678.1-201ENST00000422735 741 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC073310.1-201ENST00000423226 1033 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 MTCYBP34-201ENST00000439552 670 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.2□□□□□ -2.06
CKS1BP61024 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC073901.1-201ENST00000462471 408 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC104629.2-201ENST00000468627 598 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 PRDX3P4-201ENST00000470828 747 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC104689.1-201ENST00000473356 768 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC015908.1-201ENST00000478739 476 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC135721.1-201ENST00000497954 479 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 MTCO1P47-201ENST00000523889 1271 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.2□□□□□ -2.06
CKS1BP61024 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CKS1BP61024 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.2□□□□□ -2.06
CKS1BP61024 MIR4443-201ENST00000585052 53 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 AC008739.2-201ENST00000597006 317 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AL356575.1-201ENST00000603008 283 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AL009028.1-201ENST00000604895 802 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AL590392.1-201ENST00000604960 446 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.2□□□□□ -2.06
CKS1BP61024 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.2□□□□□ -2.06
CKS1BP61024 AC245517.5-201ENST00000611529 162 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms