Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HCFC1P51610 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 RNA5SP502-201ENST00000362694 119 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 MIR16-1-201ENST00000385271 89 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 ATP5A1P2-201ENST00000412323 255 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC245054.1-201ENST00000420944 258 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC234781.2-201ENST00000426370 994 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AL591419.1-201ENST00000427423 339 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AL390023.1-201ENST00000428836 262 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 AC005345.1-201ENST00000431868 217 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AL590103.1-201ENST00000434488 307 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 RPS20P1-201ENST00000434853 354 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC1P51610 USP9YP22-201ENST00000438971 294 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 ELOCP10-201ENST00000440624 327 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 OR6K5P-201ENST00000447050 945 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 RN7SL585P-201ENST00000470538 280 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 KLRA1P-201ENST00000503499 986 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.28□□□□□ -1.88
HCFC1P51610 AC111000.2-201ENST00000507775 550 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC118282.2-201ENST00000508739 374 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 RNA5SP154-201ENST00000516193 111 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC023632.1-201ENST00000518463 375 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AP000926.4-201ENST00000527351 454 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC1P51610 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 RFPL1S-203ENST00000539579 330 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC1P51610 AC125611.1-201ENST00000549563 229 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC004217.3-201ENST00000551552 878 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.28□□□□□ -1.88
HCFC1P51610 GTF2IP8-201ENST00000560687 584 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 AL121834.1-201ENST00000572284 509 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 AC091488.1-201ENST00000604239 660 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 ELOCP34-201ENST00000604436 327 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 AC005332.6-201ENST00000613178 446 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
HCFC1P51610 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC1P51610 ZNF833P-201ENST00000424938 1494 ntBASIC3.28□□□□□ -1.88
HCFC1P51610 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC1P51610 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.28□□□□□ -1.88
HCFC1P51610 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.89
HCFC1P51610 AP000542.2-201ENST00000623199 6179 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC1P51610 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HCFC1P51610 RSL24D1P4-201ENST00000400938 484 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 ERHP2-201ENST00000402323 299 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 AC019178.2-201ENST00000423595 505 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 CYCSP4-201ENST00000429682 331 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 UBE2D3P1-201ENST00000436669 444 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 GTF2IP7-202ENST00000436677 309 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 HLA-N-201ENST00000437516 135 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 MTCYBP3-201ENST00000445588 1137 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.27□□□□□ -1.89
HCFC1P51610 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.27□□□□□ -1.89
HCFC1P51610 RPL21P11-201ENST00000461458 483 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC011979.1-201ENST00000472300 483 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 RPS27P23-201ENST00000487608 251 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC108941.1-201ENST00000502853 530 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC109458.1-201ENST00000508858 316 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC116353.3-201ENST00000511215 249 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 RNU6-759P-201ENST00000516740 103 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.27□□□□□ -1.89
HCFC1P51610 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.27□□□□□ -1.89
HCFC1P51610 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.27□□□□□ -1.89
HCFC1P51610 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
HCFC1P51610 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.27□□□□□ -1.89
HCFC1P51610 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 AL133457.1-201ENST00000564251 987 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC1P51610 PSMA6P4-201ENST00000603247 718 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AL592221.1-201ENST00000605266 382 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC1P51610 AC080013.6-201ENST00000606185 215 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC1P51610 AC092140.2-201ENST00000618027 521 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.27□□□□□ -1.89
HCFC1P51610 AL359715.5-201ENST00000623431 443 ntBASIC3.27□□□□□ -1.89
HCFC1P51610 AL031985.3-201ENST00000565390 2449 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms