Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.11□□□□□ -1.75
HADHAP40939 ZNF876P-202ENST00000398732 1485 ntBASIC4.11□□□□□ -1.75
HADHAP40939 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.11□□□□□ -1.75
HADHAP40939 MAPK10-253ENST00000641010 4072 ntBASIC4.11□□□□□ -1.75
HADHAP40939 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HADHAP40939 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HADHAP40939 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HADHAP40939 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HADHAP40939 SNORD6-201ENST00000365444 73 ntBASIC4.1□□□□□ -1.75
HADHAP40939 RN7SKP33-201ENST00000410942 340 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.1□□□□□ -1.75
HADHAP40939 AC006960.1-201ENST00000419980 153 ntBASIC4.1□□□□□ -1.75
HADHAP40939 RPL17P36-201ENST00000420302 549 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 AL356535.1-201ENST00000440335 398 ntBASIC4.1□□□□□ -1.75
HADHAP40939 ELOCP13-201ENST00000443934 329 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 ANKRD26P4-201ENST00000455755 950 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.1□□□□□ -1.75
HADHAP40939 MTND2P14-201ENST00000482139 351 ntBASIC4.1□□□□□ -1.75
HADHAP40939 RPL31P61-201ENST00000496160 376 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC068305.1-201ENST00000497406 726 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.1□□□□□ -1.75
HADHAP40939 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 AC008802.1-201ENST00000519121 791 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HADHAP40939 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.1□□□□□ -1.75
HADHAP40939 AC107016.1-201ENST00000550463 337 ntBASIC4.1□□□□□ -1.75
HADHAP40939 EEF1B2P4-201ENST00000551398 348 ntBASIC4.1□□□□□ -1.75
HADHAP40939 GNRHR2P1-201ENST00000555315 631 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AL133457.1-201ENST00000564251 987 ntBASIC4.1□□□□□ -1.75
HADHAP40939 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.1□□□□□ -1.75
HADHAP40939 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 LARP7P2-201ENST00000575306 125 ntBASIC4.1□□□□□ -1.75
HADHAP40939 MIR5186-201ENST00000577504 120 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.1□□□□□ -1.75
HADHAP40939 BNIP3P11-201ENST00000603878 563 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AL451044.1-201ENST00000604867 238 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC107952.2-201ENST00000606048 486 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC245297.2-201ENST00000610119 565 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC090246.1-201ENST00000616499 426 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.1□□□□□ -1.75
HADHAP40939 AL359715.5-201ENST00000623431 443 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC048347.1-201ENST00000624621 427 ntBASIC4.1□□□□□ -1.75
HADHAP40939 OR5BR1P-201ENST00000524992 1330 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AL356473.1-201ENST00000406203 1408 ntBASIC4.1□□□□□ -1.75
HADHAP40939 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HADHAP40939 OTUD4P1-201ENST00000237841 3067 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AC097714.1-201ENST00000511272 1647 ntBASIC4.1□□□□□ -1.75
HADHAP40939 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HADHAP40939 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.09□□□□□ -1.75
HADHAP40939 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HADHAP40939 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HADHAP40939 OR11H4-201ENST00000315409 1082 ntBASIC4.09□□□□□ -1.75
HADHAP40939 SNORA51.2-201ENST00000364595 132 ntBASIC4.09□□□□□ -1.75
HADHAP40939 RNU6-83P-201ENST00000384568 112 ntBASIC4.09□□□□□ -1.75
HADHAP40939 U3.29-201ENST00000391296 212 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AL022722.2-201ENST00000402519 180 ntBASIC4.09□□□□□ -1.75
HADHAP40939 MIR1284-201ENST00000408337 120 ntBASIC4.09□□□□□ -1.75
HADHAP40939 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AC093698.1-201ENST00000423843 571 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.09□□□□□ -1.75
HADHAP40939 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.09□□□□□ -1.75
HADHAP40939 CYCSP43-201ENST00000438233 310 ntBASIC4.09□□□□□ -1.75
HADHAP40939 MTND3P1-201ENST00000441336 220 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.09□□□□□ -1.75
HADHAP40939 USP9YP10-201ENST00000454868 628 ntBASIC4.09□□□□□ -1.75
HADHAP40939 MTCO3P11-201ENST00000455103 774 ntBASIC4.09□□□□□ -1.75
HADHAP40939 NECAP1P2-201ENST00000455668 727 ntBASIC4.09□□□□□ -1.75
HADHAP40939 RPS7P7-201ENST00000463499 571 ntBASIC4.09□□□□□ -1.75
HADHAP40939 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HADHAP40939 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HADHAP40939 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.09□□□□□ -1.75
HADHAP40939 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HADHAP40939 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.09□□□□□ -1.75
HADHAP40939 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.09□□□□□ -1.75
HADHAP40939 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.09□□□□□ -1.75
HADHAP40939 XKRY-201ENST00000510392 1100 ntBASIC4.09□□□□□ -1.75
HADHAP40939 USP9YP5-201ENST00000511770 630 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AC006499.2-201ENST00000513470 337 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.09□□□□□ -1.75
HADHAP40939 EEF1A1P37-201ENST00000522748 715 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
HADHAP40939 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.09□□□□□ -1.75
HADHAP40939 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.09□□□□□ -1.75
HADHAP40939 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.09□□□□□ -1.75
HADHAP40939 AC025627.2-201ENST00000576220 160 ntBASIC4.09□□□□□ -1.75
HADHAP40939 MIR5684-201ENST00000585074 65 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AL355816.2-201ENST00000610049 647 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AC025588.4-201ENST00000615802 908 ntBASIC4.09□□□□□ -1.75
HADHAP40939 MIR7151-201ENST00000617477 60 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms