Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.70-201ENST00000362886 110 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RNU1-20P-201ENST00000363314 162 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AL583835.1-201ENST00000399570 407 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC097374.1-203ENST00000400783 485 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 HMGB1P17-201ENST00000403495 628 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 Y_RNA.608-201ENST00000410647 95 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RNU2-41P-201ENST00000410991 178 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RPL6P29-201ENST00000414863 865 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC004690.1-201ENST00000418216 328 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RPL7P30-201ENST00000420888 709 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AL139413.1-201ENST00000421309 217 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 COX6CP17-201ENST00000421389 185 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP4O75379 SDCBPP2-201ENST00000424643 885 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RPL18P10-201ENST00000425606 538 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC016712.1-201ENST00000431088 378 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 SKP1P1-201ENST00000438081 489 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC098614.3-201ENST00000438957 440 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP4O75379 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP4O75379 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 MTCO1P48-201ENST00000448024 1096 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 GAPDHP17-201ENST00000449858 1001 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 EIF4A1P11-201ENST00000451239 222 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC005229.2-201ENST00000456995 399 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RPL23AP24-201ENST00000458203 385 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 RN7SL817P-201ENST00000480777 288 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 KCTD9P5-201ENST00000504141 1170 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP4O75379 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC026412.2-201ENST00000512270 1075 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP4O75379 AP000790.1-201ENST00000528891 737 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC013828.2-201ENST00000532487 235 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 GSTP1P1-201ENST00000548078 319 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.65□□□□□ -1.5
VAMP4O75379 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC008945.2-201ENST00000606056 604 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VAMP4O75379 AC007546.2-201ENST00000623996 360 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VAMP4O75379 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 AL592182.3-201ENST00000642132 3304 ntBASIC5.65□□□□□ -1.51
VAMP4O75379 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.65□□□□□ -1.51
VAMP4O75379 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
VAMP4O75379 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VAMP4O75379 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
VAMP4O75379 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VAMP4O75379 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
VAMP4O75379 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.64□□□□□ -1.51
VAMP4O75379 DDX18P3-201ENST00000404856 2007 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 OR11H4-201ENST00000315409 1082 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 Y_RNA.402-201ENST00000383972 102 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 RNU6-533P-201ENST00000384144 107 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 RNU6-761P-201ENST00000384148 107 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AL078604.1-201ENST00000404609 466 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 RPS20P14-201ENST00000412545 360 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.64□□□□□ -1.51
VAMP4O75379 MTATP6P27-201ENST00000416987 621 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 RPL23AP25-201ENST00000430973 463 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.64□□□□□ -1.51
VAMP4O75379 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.64□□□□□ -1.51
VAMP4O75379 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.64□□□□□ -1.51
VAMP4O75379 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.64□□□□□ -1.51
VAMP4O75379 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.64□□□□□ -1.51
VAMP4O75379 MTND6P13-201ENST00000443510 523 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.64□□□□□ -1.51
VAMP4O75379 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.64□□□□□ -1.51
VAMP4O75379 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.64□□□□□ -1.51
VAMP4O75379 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VAMP4O75379 APOOP2-201ENST00000461561 539 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 RPL23AP65-201ENST00000475608 468 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 RN7SL810P-201ENST00000493031 276 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 HMGB1P29-201ENST00000505659 499 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AC022447.3-201ENST00000506865 495 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 SAP18P1-201ENST00000512058 390 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.64□□□□□ -1.51
VAMP4O75379 RNA5SP464-201ENST00000516251 108 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.64□□□□□ -1.51
VAMP4O75379 AP001893.2-201ENST00000526949 202 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 OR5BC1P-201ENST00000529327 739 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.64□□□□□ -1.51
VAMP4O75379 RPL21P7-201ENST00000557463 483 ntBASIC5.64□□□□□ -1.51
VAMP4O75379 SULT1C2P1-202ENST00000562418 459 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms