Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL031679.1-201ENST00000400616 525 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL354719.1-201ENST00000406535 843 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL133384.1-201ENST00000412744 351 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 ELOCP4-201ENST00000420090 333 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC019097.1-201ENST00000424783 735 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPL35AP12-201ENST00000425362 338 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPL12P3-201ENST00000440080 396 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPL7P12-201ENST00000446719 750 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPL7L1P1-201ENST00000448259 785 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL513533.1-201ENST00000453728 415 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL133244.1-201ENST00000456007 258 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPSAP50-201ENST00000481955 852 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPS21P4-201ENST00000487122 248 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC004453.1-201ENST00000487895 408 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC096576.1-201ENST00000489014 359 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RPS4XP18-201ENST00000495480 763 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 PCBP2P3-201ENST00000509726 843 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RNA5SP401-201ENST00000515920 127 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RNU6-1045P-201ENST00000516321 107 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC126177.5-201ENST00000549599 178 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 HMGN2P6-201ENST00000551091 273 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC018552.1-201ENST00000562099 811 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 MIR3691-201ENST00000578066 90 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 MIR4700-201ENST00000578311 74 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 MIR3118-1-201ENST00000581787 76 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC008814.1-201ENST00000603797 406 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL360085.1-201ENST00000604713 532 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 TPTEP1-208ENST00000636884 213 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC100810.6-201ENST00000638068 285 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 KPNA2P2-201ENST00000419546 1489 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 SMG1P4-204ENST00000523028 4131 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 Y_RNA.67-201ENST00000362870 100 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RNA5SP335-201ENST00000363817 110 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RNU6-108P-201ENST00000365558 107 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 SNORA20.2-201ENST00000383922 131 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RNU6-74P-201ENST00000384235 107 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 SNORA16A-201ENST00000384342 137 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 EIF5P1-201ENST00000400019 1231 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AL162578.1-201ENST00000406202 378 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RPL37P1-201ENST00000432310 284 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AP000936.3-201ENST00000438127 255 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 USP9YP15-201ENST00000442391 422 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC010587.1-201ENST00000505809 469 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RNU7-30P-201ENST00000516835 62 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RN7SKP96-201ENST00000516948 297 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 CYCSP28-201ENST00000534284 321 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 LLPHP1-201ENST00000603571 367 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC115621.1-201ENST00000604653 858 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC121334.2-201ENST00000605387 271 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 uc_338.5-201ENST00000611839 155 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC243654.2-201ENST00000612843 443 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC233309.1-201ENST00000619522 751 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC091953.2-201ENST00000623979 160 ntBASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
FOXP3Q9BZS1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms