Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC090151.1-201ENST00000520784 730 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC060788.1-201ENST00000521318 469 ntBASIC5□□□□□ -1.61
NUP88Q99567 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5□□□□□ -1.61
NUP88Q99567 HSPA8P13-201ENST00000523715 472 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC100770.1-201ENST00000532310 322 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC013828.2-201ENST00000532487 235 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC007115.1-201ENST00000546853 234 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC024909.2-201ENST00000553035 286 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5□□□□□ -1.61
NUP88Q99567 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5□□□□□ -1.61
NUP88Q99567 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5□□□□□ -1.61
NUP88Q99567 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5□□□□□ -1.61
NUP88Q99567 AC022146.1-201ENST00000595307 847 ntBASIC5□□□□□ -1.61
NUP88Q99567 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 MIR6867-201ENST00000610636 67 ntBASIC5□□□□□ -1.61
NUP88Q99567 AC024941.1-201ENST00000612250 334 ntBASIC5□□□□□ -1.61
NUP88Q99567 HULC.1-201ENST00000612720 240 ntBASIC5□□□□□ -1.61
NUP88Q99567 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5□□□□□ -1.61
NUP88Q99567 MIR492-201ENST00000638676 116 ntBASIC5□□□□□ -1.61
NUP88Q99567 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP88Q99567 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 ZNF33CP-201ENST00000432492 2030 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC015813.6-201ENST00000624409 5808 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 RNA5SP307-201ENST00000362863 116 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 RNU6-777P-201ENST00000364265 104 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 MTCYBP36-201ENST00000404146 440 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 MIR1250-201ENST00000408098 113 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 RPL31P2-201ENST00000413849 377 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AL389915.1-201ENST00000422463 466 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 AL365184.2-201ENST00000431139 435 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.99□□□□□ -1.61
NUP88Q99567 LSM1P1-201ENST00000438629 273 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 TAF9P1-201ENST00000445421 515 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 BMI1P1-201ENST00000445879 941 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 USP9YP34-201ENST00000453983 808 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 TAF9P2-201ENST00000454958 515 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC022034.3-201ENST00000471393 478 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC106872.3-201ENST00000495104 446 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 RPS27AP13-201ENST00000498403 237 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC091435.1-201ENST00000505442 584 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC093809.1-201ENST00000509155 340 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 PGBD4P4-201ENST00000509673 613 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC024589.1-201ENST00000512207 263 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC134698.5-201ENST00000519444 336 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC024224.1-201ENST00000538284 609 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP88Q99567 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUP88Q99567 HNRNPCP4-201ENST00000571636 900 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC008759.1-201ENST00000589783 983 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC119751.7-201ENST00000600494 245 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC073544.2-201ENST00000601155 540 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 RPL23AP92-201ENST00000603609 255 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP88Q99567 AL161637.1-201ENST00000622380 412 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUP88Q99567 AC008013.2-202ENST00000637965 364 ntBASIC4.99□□□□□ -1.61
NUP88Q99567 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP88Q99567 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP88Q99567 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NUP88Q99567 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP88Q99567 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
NUP88Q99567 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUP88Q99567 AL390237.1-201ENST00000404226 1415 ntBASIC4.98□□□□□ -1.61
NUP88Q99567 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
NUP88Q99567 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms