Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL355578.1-201ENST00000607405 1328 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 OR4A15-201ENST00000314706 1035 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 RNVU1-3-201ENST00000364313 161 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 MIR217-201ENST00000384817 110 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 MIR192-201ENST00000384915 110 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-55P-201ENST00000411092 107 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-954P-201ENST00000411355 107 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 DPPA2P1-201ENST00000428060 556 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 TXNP1-201ENST00000441872 371 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL606517.1-201ENST00000446914 387 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC010655.1-201ENST00000449336 292 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 NDUFA12P1-201ENST00000455914 406 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC010618.1-201ENST00000469924 477 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC087312.1-201ENST00000471411 480 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC069528.1-202ENST00000482888 637 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AP003730.1-201ENST00000524605 285 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 LSM6P2-201ENST00000552208 177 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 OR4H12P-201ENST00000556269 907 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AGGF1P6-201ENST00000569213 976 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC005951.1-201ENST00000576706 485 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC099676.1-201ENST00000608886 657 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL592148.2-201ENST00000612210 372 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL354976.1-201ENST00000613843 387 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC090116.1-201ENST00000615679 446 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC010975.3-201ENST00000618727 978 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC068722.2-201ENST00000618734 544 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC109454.4-201ENST00000623411 649 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AC087821.2-201ENST00000637086 450 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 SRP72P2-201ENST00000344851 1979 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AL353746.1-201ENST00000566293 6881 ntBASIC3.05□□□□□ -1.92
CCDC71LQ8N9Z2 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL121978.1-201ENST00000402778 359 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL079342.2-201ENST00000403367 482 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL138880.1-201ENST00000405824 642 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL354719.1-201ENST00000406535 843 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 RBMY2KP-201ENST00000418221 992 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 KRR1P1-201ENST00000419430 803 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 RPL21P66-201ENST00000426566 466 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 Z93242.1-201ENST00000427102 353 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 KCTD10P1-201ENST00000434203 625 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC093155.1-201ENST00000440164 826 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 OR10R1P-201ENST00000441524 1141 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 HMGB3P6-201ENST00000444896 598 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC104308.1-201ENST00000454621 333 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 RPL35AP28-201ENST00000459730 331 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 RPL21P8-201ENST00000465083 535 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC022034.3-201ENST00000471393 478 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 RPL21P131-201ENST00000497298 483 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 MTCO2P32-201ENST00000514865 403 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 OR4A45P-201ENST00000529954 901 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AP001317.1-201ENST00000531194 960 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC093519.1-201ENST00000566109 298 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 MIR4666A-201ENST00000580160 79 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC113368.1-201ENST00000603736 382 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 RNU4-5P-201ENST00000607255 135 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL513477.2-201ENST00000607858 568 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AL451074.6-201ENST00000608512 729 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC092954.1-201ENST00000609121 445 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms