Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF4P78317 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF4P78317 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF4P78317 MIR369-201ENST00000362155 70 ntBASIC5.15□□□□□ -1.59
RNF4P78317 RNA5SP319-201ENST00000362768 119 ntBASIC5.15□□□□□ -1.59
RNF4P78317 RNA5SP132-201ENST00000364725 118 ntBASIC5.15□□□□□ -1.59
RNF4P78317 Y_RNA.315-201ENST00000365117 102 ntBASIC5.15□□□□□ -1.59
RNF4P78317 MIR323B-201ENST00000385269 82 ntBASIC5.15□□□□□ -1.59
RNF4P78317 RNU6-903P-201ENST00000391270 109 ntBASIC5.15□□□□□ -1.59
RNF4P78317 OR4K12P-201ENST00000406538 961 ntBASIC5.15□□□□□ -1.59
RNF4P78317 OR3A2-201ENST00000408891 1076 ntBASIC5.15□□□□□ -1.59
RNF4P78317 BX323014.1-201ENST00000412876 237 ntBASIC5.15□□□□□ -1.59
RNF4P78317 Z93019.1-201ENST00000416450 973 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF4P78317 AC079355.1-201ENST00000421770 223 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AC007161.1-204ENST00000423039 460 ntBASIC5.15□□□□□ -1.59
RNF4P78317 MED13P1-201ENST00000428342 171 ntBASIC5.15□□□□□ -1.59
RNF4P78317 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF4P78317 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF4P78317 AL353691.1-201ENST00000451332 387 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF4P78317 AC106872.2-201ENST00000494303 480 ntBASIC5.15□□□□□ -1.59
RNF4P78317 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF4P78317 AC116562.3-201ENST00000506136 177 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF4P78317 RNU6-559P-201ENST00000516151 98 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF4P78317 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF4P78317 AC068587.5-201ENST00000528506 175 ntBASIC5.15□□□□□ -1.59
RNF4P78317 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF4P78317 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF4P78317 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF4P78317 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF4P78317 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RNF4P78317 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF4P78317 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF4P78317 AC116312.1-201ENST00000606841 314 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF4P78317 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF4P78317 AL118522.2-201ENST00000616045 615 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AL136313.1-201ENST00000624804 202 ntBASIC5.15□□□□□ -1.59
RNF4P78317 MTND4LP32-201ENST00000636111 270 ntBASIC5.15□□□□□ -1.59
RNF4P78317 AC000095.2-202ENST00000637415 154 ntBASIC5.15□□□□□ -1.59
RNF4P78317 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF4P78317 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF4P78317 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF4P78317 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF4P78317 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.15□□□□□ -1.59
RNF4P78317 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF4P78317 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF4P78317 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF4P78317 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF4P78317 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AC010329.2-201ENST00000595195 2737 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF4P78317 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AL138713.1-201ENST00000624026 2130 ntBASIC5.14□□□□□ -1.59
RNF4P78317 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF4P78317 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF4P78317 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF4P78317 Y_RNA.100-201ENST00000363141 102 ntBASIC5.14□□□□□ -1.59
RNF4P78317 U3.10-201ENST00000364459 214 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RNU6-522P-201ENST00000364497 107 ntBASIC5.14□□□□□ -1.59
RNF4P78317 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RNF4P78317 RNU6-1029P-201ENST00000384109 107 ntBASIC5.14□□□□□ -1.59
RNF4P78317 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF4P78317 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RPS15AP40-201ENST00000419621 391 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RPL7L1P10-201ENST00000427790 463 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF4P78317 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF4P78317 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF4P78317 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF4P78317 RNU7-182P-201ENST00000459009 62 ntBASIC5.14□□□□□ -1.59
RNF4P78317 SNORD125-201ENST00000459538 96 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RN7SL51P-201ENST00000468230 285 ntBASIC5.14□□□□□ -1.59
RNF4P78317 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF4P78317 AC068305.1-201ENST00000497406 726 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RPS17P5-201ENST00000498293 408 ntBASIC5.14□□□□□ -1.59
RNF4P78317 FAM206BP-201ENST00000510179 541 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RNU6-1038P-201ENST00000516516 104 ntBASIC5.14□□□□□ -1.59
RNF4P78317 RNU7-51P-201ENST00000516560 62 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AL133271.1-201ENST00000538229 291 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF4P78317 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF4P78317 MIR4775-201ENST00000581168 75 ntBASIC5.14□□□□□ -1.59
RNF4P78317 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF4P78317 AC011477.5-201ENST00000586571 259 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AC113194.1-201ENST00000606037 500 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AL627309.6-201ENST00000606857 840 ntBASIC5.14□□□□□ -1.59
RNF4P78317 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AC004908.2-201ENST00000609090 574 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AC116447.1-201ENST00000613153 453 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AP000843.1-201ENST00000624880 701 ntBASIC5.14□□□□□ -1.59
RNF4P78317 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF4P78317 AC134503.1-201ENST00000633048 54 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms