Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.88□□□□□ -1.63
RHBDL3P58872 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 AC119751.3-201ENST00000399720 670 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDL3P58872 RNU6-712P-201ENST00000410558 100 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 TPMTP2-201ENST00000414372 726 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDL3P58872 CYP4F29P-201ENST00000420685 446 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AL389915.1-201ENST00000422463 466 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 AL590233.1-201ENST00000430017 456 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 HIGD1AP4-201ENST00000430194 280 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 EZH2P1-201ENST00000431167 291 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 MTND4LP10-201ENST00000435146 291 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 RPS4XP15-201ENST00000489210 795 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDL3P58872 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDL3P58872 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AC093281.2-201ENST00000510153 597 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 MTND4LP31-201ENST00000514859 294 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 SNORA3.4-201ENST00000515969 96 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AC024224.1-201ENST00000538284 609 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AC018630.1-201ENST00000541376 925 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AC090615.1-201ENST00000577519 154 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.87□□□□□ -1.63
RHBDL3P58872 MIR4429-201ENST00000580105 73 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.87□□□□□ -1.63
RHBDL3P58872 AL451086.1-201ENST00000605596 223 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AL356863.1-201ENST00000623378 1080 ntBASIC4.87□□□□□ -1.63
RHBDL3P58872 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDL3P58872 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDL3P58872 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
RHBDL3P58872 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.87□□□□□ -1.63
RHBDL3P58872 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RHBDL3P58872 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RHBDL3P58872 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.86□□□□□ -1.63
RHBDL3P58872 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC067945.1-201ENST00000342609 618 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 OR1AA1P-201ENST00000419597 916 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 PTP4A1P5-201ENST00000420305 455 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AL691449.1-201ENST00000426570 421 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 RPL7P2-201ENST00000427639 268 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.86□□□□□ -1.63
RHBDL3P58872 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 MUPP-201ENST00000438111 566 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 SDCBPP1-201ENST00000440192 890 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC005297.2-201ENST00000450430 606 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 RPS11P1-201ENST00000451072 473 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 RPS24P6-201ENST00000452670 400 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 RNU7-136P-201ENST00000458819 69 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 snoU13.24-201ENST00000458998 104 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AP001992.1-205ENST00000462248 379 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 SNORA31.20-201ENST00000517111 133 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 HSPE1P5-201ENST00000561489 272 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AC021755.4-201ENST00000616620 456 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC006133.1-201ENST00000617106 264 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC039056.2-201ENST00000622261 511 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AP000770.2-201ENST00000623694 100 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RHBDL3P58872 AP000676.4-201ENST00000624659 623 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 OR8B1P-202ENST00000641132 1178 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 AC016588.2-201ENST00000632484 3021 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDL3P58872 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.86□□□□□ -1.63
RHBDL3P58872 MTND4P34-201ENST00000572715 1371 ntBASIC4.86□□□□□ -1.63
RHBDL3P58872 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDL3P58872 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RHBDL3P58872 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms