Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 ENSAP1-201ENST00000392855 326 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 Z99497.1-201ENST00000421282 135 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 C4BPAP2-201ENST00000428434 478 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN9P43378 UBE2FP3-201ENST00000436366 524 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AL353748.1-201ENST00000440753 474 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN9P43378 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPN9P43378 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN9P43378 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN9P43378 RPL31P3-201ENST00000458430 332 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AC097493.1-201ENST00000463958 372 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 RPS15AP17-201ENST00000470598 390 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 OR4G11P-201ENST00000492842 939 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AC025445.1-201ENST00000502728 300 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 MTCYBP17-201ENST00000503579 789 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN9P43378 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AC008127.2-201ENST00000549925 1075 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.25□□□□□ -1.73
PTPN9P43378 AC025884.1-201ENST00000556034 378 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AC021755.1-201ENST00000559747 1447 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN9P43378 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPN9P43378 AC022968.1-201ENST00000567372 442 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN9P43378 AL590229.1-201ENST00000603497 542 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AC012603.1-201ENST00000606424 528 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN9P43378 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN9P43378 MIR378J-201ENST00000611988 109 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 MIR492-201ENST00000638676 116 ntBASIC4.25□□□□□ -1.73
PTPN9P43378 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPN9P43378 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN9P43378 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN9P43378 ELL2P3-201ENST00000457883 1602 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC130650.2-201ENST00000618736 2403 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PTPN9P43378 RNU6-462P-201ENST00000362659 105 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 MIR3074-201ENST00000384885 81 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AL024474.1-201ENST00000404655 591 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 HSPE1P12-201ENST00000412576 301 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 SEPT2P1-201ENST00000419651 180 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 CYP4F29P-201ENST00000420685 446 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 COX6CP17-201ENST00000421389 185 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 OR4F13P-201ENST00000428478 931 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN9P43378 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 AC098826.1-201ENST00000433943 471 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AL356276.2-201ENST00000435919 558 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 MTND4P32-201ENST00000437189 1237 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC118469.1-201ENST00000442943 488 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 RPS4XP4-201ENST00000443195 763 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 TPT1P12-201ENST00000448968 492 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 RPS27AP8-201ENST00000452665 445 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PTPN9P43378 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN9P43378 LTV1P1-201ENST00000510683 1237 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN9P43378 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 HSPA8P13-201ENST00000523715 472 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 OR4A45P-201ENST00000529954 901 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.24□□□□□ -1.73
PTPN9P43378 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN9P43378 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN9P43378 AC136618.2-201ENST00000575091 400 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC025627.2-201ENST00000576220 160 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 MIR3915-201ENST00000578518 97 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AL031985.2-201ENST00000600955 480 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC004825.2-201ENST00000616634 455 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 AC006338.2-201ENST00000616864 791 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 MIR6758-201ENST00000620653 63 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC091931.1-201ENST00000623488 728 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 AC231657.1-201ENST00000624313 397 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 MIR6830-201ENST00000636015 70 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms